Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RPS3AP61247 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS3AP61247 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
RPS3AP61247 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS3AP61247 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPS3AP61247 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS3AP61247 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS3AP61247 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS3AP61247 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.73■□□□□ 0.91
RPS3AP61247 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS3AP61247 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS3AP61247 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RPS3AP61247 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.73■□□□□ 0.91
RPS3AP61247 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS3AP61247 AC131212.1-201ENST00000613771 668 ntBASIC20.73■□□□□ 0.91
RPS3AP61247 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.73■□□□□ 0.91
RPS3AP61247 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RPS3AP61247 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPS3AP61247 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.72■□□□□ 0.91
RPS3AP61247 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RPS3AP61247 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RPS3AP61247 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.72■□□□□ 0.91
RPS3AP61247 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS3AP61247 SNX5-217ENST00000606557 1087 ntBASIC20.72■□□□□ 0.91
RPS3AP61247 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS3AP61247 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.72■□□□□ 0.91
RPS3AP61247 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS3AP61247 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RPS3AP61247 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS3AP61247 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS3AP61247 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RPS3AP61247 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RPS3AP61247 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.71■□□□□ 0.91
RPS3AP61247 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.71■□□□□ 0.91
RPS3AP61247 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS3AP61247 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS3AP61247 AL022069.1-201ENST00000568025 1636 ntBASIC20.71■□□□□ 0.91
RPS3AP61247 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
RPS3AP61247 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RPS3AP61247 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS3AP61247 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RPS3AP61247 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS3AP61247 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS3AP61247 AC004448.1-201ENST00000458332 883 ntBASIC20.7■□□□□ 0.9
RPS3AP61247 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RPS3AP61247 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS3AP61247 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.7■□□□□ 0.9
RPS3AP61247 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.7■□□□□ 0.9
RPS3AP61247 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.7■□□□□ 0.9
RPS3AP61247 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS3AP61247 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPS3AP61247 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS3AP61247 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.7■□□□□ 0.9
RPS3AP61247 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS3AP61247 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RPS3AP61247 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.69■□□□□ 0.9
RPS3AP61247 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS3AP61247 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPS3AP61247 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.69■□□□□ 0.9
RPS3AP61247 MIR6724-1-201ENST00000616420 92 ntBASIC20.69■□□□□ 0.9
RPS3AP61247 MIR6724-2-201ENST00000616483 92 ntBASIC20.69■□□□□ 0.9
RPS3AP61247 MIR6722-201ENST00000617286 78 ntBASIC20.69■□□□□ 0.9
RPS3AP61247 MIR6724-4-201ENST00000617390 92 ntBASIC20.69■□□□□ 0.9
RPS3AP61247 MIR6724-3-201ENST00000622482 92 ntBASIC20.69■□□□□ 0.9
RPS3AP61247 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.69■□□□□ 0.9
RPS3AP61247 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPS3AP61247 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS3AP61247 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPS3AP61247 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
RPS3AP61247 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS3AP61247 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RPS3AP61247 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPS3AP61247 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS3AP61247 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS3AP61247 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS3AP61247 HLA-L-211ENST00000482052 1765 ntBASIC20.68■□□□□ 0.9
RPS3AP61247 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.68■□□□□ 0.9
RPS3AP61247 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS3AP61247 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.68■□□□□ 0.9
RPS3AP61247 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RPS3AP61247 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.68■□□□□ 0.9
RPS3AP61247 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS3AP61247 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS3AP61247 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS3AP61247 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS3AP61247 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS3AP61247 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
RPS3AP61247 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS3AP61247 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPS3AP61247 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.67■□□□□ 0.9
RPS3AP61247 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.67■□□□□ 0.9
RPS3AP61247 AL161729.1-201ENST00000604104 1402 ntBASIC20.67■□□□□ 0.9
RPS3AP61247 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPS3AP61247 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.67■□□□□ 0.9
RPS3AP61247 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.67■□□□□ 0.9
RPS3AP61247 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.67■□□□□ 0.9
RPS3AP61247 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPS3AP61247 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPS3AP61247 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPS3AP61247 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms