Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 YHR177WYHR177W 1362 nt4.8□□□□□ -1.64
RPT4P53549 SSL1YLR005W 1386 nt4.8□□□□□ -1.64
RPT4P53549 CWH43YCR017C 2862 nt4.8□□□□□ -1.64
RPT4P53549 YDL109CYDL109C 1944 nt4.8□□□□□ -1.64
RPT4P53549 VHS2YIL135C 1311 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)CtK(CUU)C 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)D1tK(CUU)D1 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)D2tK(CUU)D2 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)E1tK(CUU)E1 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)E2tK(CUU)E2 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)FtK(CUU)F 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)G1tK(CUU)G1 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)G2tK(CUU)G2 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)G3tK(CUU)G3 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)ItK(CUU)I 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)JtK(CUU)J 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)KtK(CUU)K 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)MtK(CUU)M 73 nt4.8□□□□□ -1.64
RPT4P53549 tK(CUU)PtK(CUU)P 73 nt4.8□□□□□ -1.64
RPT4P53549 MRP4YHL004W 1185 nt4.8□□□□□ -1.64
RPT4P53549 RPS0BYLR048W 759 nt4.8□□□□□ -1.64
RPT4P53549 NCE103YNL036W 666 nt4.8□□□□□ -1.64
RPT4P53549 DSE3YOR264W 1293 nt4.8□□□□□ -1.64
RPT4P53549 COX11YPL132W 903 nt4.8□□□□□ -1.64
RPT4P53549 SUA7YPR086W 1038 nt4.8□□□□□ -1.64
RPT4P53549 CDC48YDL126C 2508 nt4.79□□□□□ -1.64
RPT4P53549 YDR056CYDR056C 618 nt4.79□□□□□ -1.64
RPT4P53549 MSW1YDR268W 1140 nt4.79□□□□□ -1.64
RPT4P53549 FLD1YLR404W 858 nt4.79□□□□□ -1.64
RPT4P53549 ISA2YPR067W 558 nt4.79□□□□□ -1.64
RPT4P53549 MET16YPR167C 786 nt4.79□□□□□ -1.64
RPT4P53549 SLX1YBR228W 915 nt4.79□□□□□ -1.64
RPT4P53549 KRS1YDR037W 1776 nt4.78□□□□□ -1.64
RPT4P53549 NOC4YPR144C 1659 nt4.78□□□□□ -1.64
RPT4P53549 YFR035CYFR035C 345 nt4.78□□□□□ -1.64
RPT4P53549 YHR173CYHR173C 339 nt4.78□□□□□ -1.64
RPT4P53549 TVP38YKR088C 1014 nt4.78□□□□□ -1.64
RPT4P53549 SEC72YLR292C 582 nt4.78□□□□□ -1.64
RPT4P53549 YPL071CYPL071C 471 nt4.78□□□□□ -1.64
RPT4P53549 EKI1YDR147W 1605 nt4.78□□□□□ -1.64
RPT4P53549 MSC7YHR039C 1935 nt4.78□□□□□ -1.64
RPT4P53549 SEG2YKL105C 3399 nt4.78□□□□□ -1.65
RPT4P53549 BOP2YLR267W 1713 nt4.77□□□□□ -1.65
RPT4P53549 YER084WYER084W 387 nt4.77□□□□□ -1.65
RPT4P53549 RMR1YGL250W 726 nt4.77□□□□□ -1.65
RPT4P53549 SUI1YNL244C 327 nt4.77□□□□□ -1.65
RPT4P53549 BUB3YOR026W 1026 nt4.77□□□□□ -1.65
RPT4P53549 MBP1YDL056W 2502 nt4.77□□□□□ -1.65
RPT4P53549 DEG1YFL001W 1329 nt4.76□□□□□ -1.65
RPT4P53549 LDB17YDL146W 1476 nt4.76□□□□□ -1.65
RPT4P53549 CTF18YMR078C 2226 nt4.76□□□□□ -1.65
RPT4P53549 YEL045CYEL045C 426 nt4.76□□□□□ -1.65
RPT4P53549 YLR036CYLR036C 612 nt4.76□□□□□ -1.65
RPT4P53549 NUP2YLR335W 2163 nt4.76□□□□□ -1.65
RPT4P53549 YNR065CYNR065C 3351 nt4.76□□□□□ -1.65
RPT4P53549 PMT5YDL093W 2232 nt4.76□□□□□ -1.65
RPT4P53549 RIA1YNL163C 3333 nt4.75□□□□□ -1.65
RPT4P53549 MET4YNL103W 2019 nt4.75□□□□□ -1.65
RPT4P53549 HPC2YBR215W 1878 nt4.75□□□□□ -1.65
RPT4P53549 THI22YPR121W 1719 nt4.75□□□□□ -1.65
RPT4P53549 TRM8YDL201W 861 nt4.75□□□□□ -1.65
RPT4P53549 UBC1YDR177W 648 nt4.75□□□□□ -1.65
RPT4P53549 DSD1YGL196W 1287 nt4.75□□□□□ -1.65
RPT4P53549 YLR154W-BYLR154W-B 165 nt4.75□□□□□ -1.65
RPT4P53549 GRE1YPL223C 507 nt4.75□□□□□ -1.65
RPT4P53549 YBR196C-BYBR196C-B 105 nt4.75□□□□□ -1.65
RPT4P53549 SEO1YAL067C 1782 nt4.75□□□□□ -1.65
RPT4P53549 FAR8YMR029C 1572 nt4.74□□□□□ -1.65
RPT4P53549 SAS10YDL153C 1833 nt4.74□□□□□ -1.65
RPT4P53549 PRM7YDL039C 2097 nt4.74□□□□□ -1.65
RPT4P53549 NFI1YOR156C 2181 nt4.74□□□□□ -1.65
RPT4P53549 YDR161WYDR161W 1164 nt4.74□□□□□ -1.65
RPT4P53549 DPH1YIL103W 1278 nt4.74□□□□□ -1.65
RPT4P53549 MHO1YJR008W 1017 nt4.74□□□□□ -1.65
RPT4P53549 SFK1YKL051W 1062 nt4.74□□□□□ -1.65
RPT4P53549 TIF34YMR146C 1044 nt4.74□□□□□ -1.65
RPT4P53549 YIM1YMR152W 1098 nt4.74□□□□□ -1.65
RPT4P53549 PPA2YMR267W 933 nt4.74□□□□□ -1.65
RPT4P53549 YBR126W-AYBR126W-A 207 nt4.74□□□□□ -1.65
RPT4P53549 DAL81YIR023W 2913 nt4.74□□□□□ -1.65
RPT4P53549 PRP43YGL120C 2304 nt4.73□□□□□ -1.65
RPT4P53549 YBR139WYBR139W 1527 nt4.73□□□□□ -1.65
RPT4P53549 RFT1YBL020W 1725 nt4.73□□□□□ -1.65
RPT4P53549 RPL24AYGL031C 468 nt4.73□□□□□ -1.65
RPT4P53549 YGL063C-AYGL063C-A 150 nt4.73□□□□□ -1.65
RPT4P53549 YLR402WYLR402W 192 nt4.73□□□□□ -1.65
RPT4P53549 SNO1YMR095C 675 nt4.73□□□□□ -1.65
RPT4P53549 NRG2YBR066C 663 nt4.73□□□□□ -1.65
RPT4P53549 ARO80YDR421W 2853 nt4.73□□□□□ -1.65
RPT4P53549 CNL1YDR357C 369 nt4.72□□□□□ -1.65
RPT4P53549 OTU1YFL044C 906 nt4.72□□□□□ -1.65
RPT4P53549 YGL199CYGL199C 471 nt4.72□□□□□ -1.65
RPT4P53549 YKL162C-AYKL162C-A 153 nt4.72□□□□□ -1.65
RPT4P53549 PSR1YLL010C 1284 nt4.72□□□□□ -1.65
RPT4P53549 YOL019W-AYOL019W-A 153 nt4.72□□□□□ -1.65
RPT4P53549 SRB6YBR253W 366 nt4.72□□□□□ -1.65
RPT4P53549 TDA1YMR291W 1761 nt4.72□□□□□ -1.65
RPT4P53549 GPR1YDL035C 2886 nt4.72□□□□□ -1.65
RPT4P53549 ADE6YGR061C 4077 nt4.71□□□□□ -1.66
RPT4P53549 SSH1YBR283C 1473 nt4.71□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms