Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	YNR025C	YNR025C	360 nt		5.07	□□□□□ -1.6
CAF16	P43569	YAP7	YOL028C	738 nt		5.07	□□□□□ -1.6
CAF16	P43569	FDH1	YOR388C	1131 nt		5.07	□□□□□ -1.6
CAF16	P43569	YPR074W-A	YPR074W-A	171 nt		5.07	□□□□□ -1.6
CAF16	P43569	YBR116C	YBR116C	528 nt		5.07	□□□□□ -1.6
CAF16	P43569	MEF2	YJL102W	2460 nt		5.07	□□□□□ -1.6
CAF16	P43569	RCM1	YNL022C	1473 nt		5.07	□□□□□ -1.6
CAF16	P43569	HSF1	YGL073W	2502 nt		5.06	□□□□□ -1.6
CAF16	P43569	PUF2	YPR042C	3228 nt		5.06	□□□□□ -1.6
CAF16	P43569	SSY5	YJL156C	2100 nt		5.06	□□□□□ -1.6
CAF16	P43569	APL6	YGR261C	2430 nt		5.06	□□□□□ -1.6
CAF16	P43569	YDR042C	YDR042C	603 nt		5.06	□□□□□ -1.6
CAF16	P43569	LCL3	YGL085W	825 nt		5.06	□□□□□ -1.6
CAF16	P43569	PRP18	YGR006W	756 nt		5.06	□□□□□ -1.6
CAF16	P43569	tR(ACG)D	tR(ACG)D	73 nt		5.06	□□□□□ -1.6
CAF16	P43569	tR(ACG)E	tR(ACG)E	73 nt		5.06	□□□□□ -1.6
CAF16	P43569	tR(ACG)K	tR(ACG)K	73 nt		5.06	□□□□□ -1.6
CAF16	P43569	tR(ACG)L	tR(ACG)L	73 nt		5.06	□□□□□ -1.6
CAF16	P43569	tR(ACG)O	tR(ACG)O	73 nt		5.06	□□□□□ -1.6
CAF16	P43569	ASK1	YKL052C	879 nt		5.06	□□□□□ -1.6
CAF16	P43569	YJU3	YKL094W	942 nt		5.06	□□□□□ -1.6
CAF16	P43569	YLR317W	YLR317W	435 nt		5.06	□□□□□ -1.6
CAF16	P43569	RPC34	YNR003C	954 nt		5.06	□□□□□ -1.6
CAF16	P43569	SAS5	YOR213C	747 nt		5.06	□□□□□ -1.6
CAF16	P43569	COX11	YPL132W	903 nt		5.06	□□□□□ -1.6
CAF16	P43569	YPR098C	YPR098C	486 nt		5.06	□□□□□ -1.6
CAF16	P43569	UMP1	YBR173C	447 nt		5.06	□□□□□ -1.6
CAF16	P43569	CTK1	YKL139W	1587 nt		5.06	□□□□□ -1.6
CAF16	P43569	ELP2	YGR200C	2367 nt		5.06	□□□□□ -1.6
CAF16	P43569	FRS1	YLR060W	1788 nt		5.06	□□□□□ -1.6
CAF16	P43569	WHI2	YOR043W	1461 nt		5.06	□□□□□ -1.6
CAF16	P43569	HPF1	YOL155C	2904 nt		5.06	□□□□□ -1.6
CAF16	P43569	CTS1	YLR286C	1689 nt		5.05	□□□□□ -1.6
CAF16	P43569	GAT2	YMR136W	1683 nt		5.05	□□□□□ -1.6
CAF16	P43569	ENT1	YDL161W	1365 nt		5.05	□□□□□ -1.6
CAF16	P43569	PST1	YDR055W	1335 nt		5.05	□□□□□ -1.6
CAF16	P43569	ZUO1	YGR285C	1302 nt		5.05	□□□□□ -1.6
CAF16	P43569	YHR202W	YHR202W	1809 nt		5.05	□□□□□ -1.6
CAF16	P43569	NTH2	YBR001C	2343 nt		5.05	□□□□□ -1.6
CAF16	P43569	STE2	YFL026W	1296 nt		5.05	□□□□□ -1.6
CAF16	P43569	CWC23	YGL128C	852 nt		5.05	□□□□□ -1.6
CAF16	P43569	LEU5	YHR002W	1074 nt		5.05	□□□□□ -1.6
CAF16	P43569	FIP1	YJR093C	984 nt		5.05	□□□□□ -1.6
CAF16	P43569	YKL091C	YKL091C	933 nt		5.05	□□□□□ -1.6
CAF16	P43569	YLR271W	YLR271W	825 nt		5.05	□□□□□ -1.6
CAF16	P43569	NAM9	YNL137C	1461 nt		5.05	□□□□□ -1.6
CAF16	P43569	ICL1	YER065C	1674 nt		5.05	□□□□□ -1.6
CAF16	P43569	YMR111C	YMR111C	1389 nt		5.04	□□□□□ -1.6
CAF16	P43569	SSU1	YPL092W	1377 nt		5.04	□□□□□ -1.6
CAF16	P43569	YNR066C	YNR066C	1311 nt		5.04	□□□□□ -1.6
CAF16	P43569	HST3	YOR025W	1344 nt		5.04	□□□□□ -1.6
CAF16	P43569	YER133W-A	YER133W-A	342 nt		5.04	□□□□□ -1.6
CAF16	P43569	GCG1	YER163C	699 nt		5.04	□□□□□ -1.6
CAF16	P43569	MF(ALPHA)2	YGL089C	363 nt		5.04	□□□□□ -1.6
CAF16	P43569	YGL117W	YGL117W	798 nt		5.04	□□□□□ -1.6
CAF16	P43569	PFS1	YHR185C	714 nt		5.04	□□□□□ -1.6
CAF16	P43569	OM45	YIL136W	1182 nt		5.04	□□□□□ -1.6
CAF16	P43569	TAE1	YBR261C	699 nt		5.04	□□□□□ -1.6
CAF16	P43569	PTC3	YBL056W	1407 nt		5.04	□□□□□ -1.6
CAF16	P43569	NHA1	YLR138W	2958 nt		5.04	□□□□□ -1.6
CAF16	P43569	KRS1	YDR037W	1776 nt		5.04	□□□□□ -1.6
CAF16	P43569	CYK3	YDL117W	2658 nt		5.03	□□□□□ -1.6
CAF16	P43569	SUL2	YLR092W	2682 nt		5.03	□□□□□ -1.6
CAF16	P43569	SUP45	YBR143C	1314 nt		5.03	□□□□□ -1.6
CAF16	P43569	KCC4	YCL024W	3114 nt		5.03	□□□□□ -1.6
CAF16	P43569	RPL35B	YDL136W	363 nt		5.03	□□□□□ -1.6
CAF16	P43569	CNL1	YDR357C	369 nt		5.03	□□□□□ -1.6
CAF16	P43569	RPN9	YDR427W	1182 nt		5.03	□□□□□ -1.6
CAF16	P43569	SFC1	YJR095W	969 nt		5.03	□□□□□ -1.6
CAF16	P43569	TSA1	YML028W	591 nt		5.03	□□□□□ -1.6
CAF16	P43569	YML047W-A	YML047W-A	366 nt		5.03	□□□□□ -1.6
CAF16	P43569	MAP2	YBL091C	1266 nt		5.03	□□□□□ -1.6
CAF16	P43569	CAM1	YPL048W	1248 nt		5.03	□□□□□ -1.6
CAF16	P43569	SIF2	YBR103W	1608 nt		5.03	□□□□□ -1.6
CAF16	P43569	MBP1	YDL056W	2502 nt		5.03	□□□□□ -1.6
CAF16	P43569	TFA1	YKL028W	1449 nt		5.03	□□□□□ -1.6
CAF16	P43569	ECM32	YER176W	3366 nt		5.03	□□□□□ -1.6
CAF16	P43569	GZF3	YJL110C	1656 nt		5.02	□□□□□ -1.61
CAF16	P43569	VHS2	YIL135C	1311 nt		5.02	□□□□□ -1.61
CAF16	P43569	RPT4	YOR259C	1314 nt		5.02	□□□□□ -1.61
CAF16	P43569	ARX1	YDR101C	1782 nt		5.02	□□□□□ -1.61
CAF16	P43569	ATG20	YDL113C	1923 nt		5.02	□□□□□ -1.61
CAF16	P43569	SUR2	YDR297W	1050 nt		5.02	□□□□□ -1.61
CAF16	P43569	RPT6	YGL048C	1218 nt		5.02	□□□□□ -1.61
CAF16	P43569	MHT1	YLL062C	975 nt		5.02	□□□□□ -1.61
CAF16	P43569	NBP1	YLR457C	960 nt		5.02	□□□□□ -1.61
CAF16	P43569	FAR3	YMR052W	615 nt		5.02	□□□□□ -1.61
CAF16	P43569	YMR130W	YMR130W	909 nt		5.02	□□□□□ -1.61
CAF16	P43569	HOR7	YMR251W-A	180 nt		5.02	□□□□□ -1.61
CAF16	P43569	RFM1	YOR279C	933 nt		5.02	□□□□□ -1.61
CAF16	P43569	YPL068C	YPL068C	882 nt		5.02	□□□□□ -1.61
CAF16	P43569	OXR1	YPL196W	822 nt		5.02	□□□□□ -1.61
CAF16	P43569	GRS1	YBR121C	2004 nt		5.02	□□□□□ -1.61
CAF16	P43569	ERG8	YMR220W	1356 nt		5.02	□□□□□ -1.61
CAF16	P43569	ALD3	YMR169C	1521 nt		5.02	□□□□□ -1.61
CAF16	P43569	ALD2	YMR170C	1521 nt		5.02	□□□□□ -1.61
CAF16	P43569	SYP1	YCR030C	2613 nt		5.01	□□□□□ -1.61
CAF16	P43569	HPR1	YDR138W	2259 nt		5.01	□□□□□ -1.61
CAF16	P43569	HEM3	YDL205C	984 nt		5.01	□□□□□ -1.61
CAF16	P43569	SRB7	YDR308C	423 nt		5.01	□□□□□ -1.61

Retrieved 100 of 7,029 protein–RNA pairs in 16 ms