Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCK1P16333 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCK1P16333 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCK1P16333 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCK1P16333 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NCK1P16333 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCK1P16333 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCK1P16333 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCK1P16333 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NCK1P16333 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCK1P16333 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
NCK1P16333 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCK1P16333 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.06■□□□□ 0.96
NCK1P16333 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.06■□□□□ 0.96
NCK1P16333 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.06■□□□□ 0.96
NCK1P16333 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.06■□□□□ 0.96
NCK1P16333 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NCK1P16333 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCK1P16333 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.05■□□□□ 0.96
NCK1P16333 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NCK1P16333 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NCK1P16333 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NCK1P16333 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCK1P16333 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NCK1P16333 AC011551.1-201ENST00000614101 683 ntBASIC21.05■□□□□ 0.96
NCK1P16333 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NCK1P16333 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.05■□□□□ 0.96
NCK1P16333 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
NCK1P16333 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.05■□□□□ 0.96
NCK1P16333 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCK1P16333 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.04■□□□□ 0.96
NCK1P16333 AL024507.2-201ENST00000606070 2574 ntBASIC21.04■□□□□ 0.96
NCK1P16333 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCK1P16333 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCK1P16333 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
NCK1P16333 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NCK1P16333 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCK1P16333 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCK1P16333 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCK1P16333 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCK1P16333 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.04■□□□□ 0.96
NCK1P16333 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCK1P16333 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NCK1P16333 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCK1P16333 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCK1P16333 C11orf96-202ENST00000528572 1834 ntBASIC21.04■□□□□ 0.96
NCK1P16333 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NCK1P16333 AC080038.3-201ENST00000623346 1952 ntBASIC21.03■□□□□ 0.96
NCK1P16333 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCK1P16333 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCK1P16333 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.03■□□□□ 0.96
NCK1P16333 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NCK1P16333 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.03■□□□□ 0.96
NCK1P16333 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCK1P16333 AL353803.4-201ENST00000565882 1934 ntBASIC21.03■□□□□ 0.96
NCK1P16333 AC092053.2-201ENST00000640557 1818 ntBASIC21.03■□□□□ 0.96
NCK1P16333 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCK1P16333 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCK1P16333 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.03■□□□□ 0.96
NCK1P16333 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NCK1P16333 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCK1P16333 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.02■□□□□ 0.96
NCK1P16333 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NCK1P16333 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.02■□□□□ 0.96
NCK1P16333 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NCK1P16333 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCK1P16333 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.02■□□□□ 0.96
NCK1P16333 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCK1P16333 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.02■□□□□ 0.96
NCK1P16333 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.02■□□□□ 0.96
NCK1P16333 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
NCK1P16333 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.01■□□□□ 0.95
NCK1P16333 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NCK1P16333 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCK1P16333 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.01■□□□□ 0.95
NCK1P16333 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
NCK1P16333 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.01■□□□□ 0.95
NCK1P16333 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCK1P16333 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.01■□□□□ 0.95
NCK1P16333 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.01■□□□□ 0.95
NCK1P16333 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.01■□□□□ 0.95
NCK1P16333 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.01■□□□□ 0.95
NCK1P16333 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.01■□□□□ 0.95
NCK1P16333 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCK1P16333 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCK1P16333 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCK1P16333 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCK1P16333 ABHD17AP3-201ENST00000503096 1137 ntBASIC21■□□□□ 0.95
NCK1P16333 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21■□□□□ 0.95
NCK1P16333 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NCK1P16333 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21■□□□□ 0.95
NCK1P16333 PKD1P6-201ENST00000343738 4769 ntBASIC21■□□□□ 0.95
NCK1P16333 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NCK1P16333 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCK1P16333 FBXW4P1-201ENST00000426721 2239 ntBASIC21■□□□□ 0.95
NCK1P16333 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21■□□□□ 0.95
NCK1P16333 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NCK1P16333 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCK1P16333 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCK1P16333 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms