Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 IXR1YKL032C 1794 nt4.45□□□□□ -1.7
RAD3P06839 TCO89YPL180W 2400 nt4.44□□□□□ -1.7
RAD3P06839 ALG6YOR002W 1635 nt4.44□□□□□ -1.7
RAD3P06839 CPR4YCR069W 957 nt4.44□□□□□ -1.7
RAD3P06839 DCV1YFR012W 609 nt4.44□□□□□ -1.7
RAD3P06839 YLR125WYLR125W 411 nt4.44□□□□□ -1.7
RAD3P06839 TRK1YJL129C 3708 nt4.44□□□□□ -1.7
RAD3P06839 UBC6YER100W 753 nt4.43□□□□□ -1.7
RAD3P06839 YER145C-AYER145C-A 438 nt4.43□□□□□ -1.7
RAD3P06839 FRA2YGL220W 363 nt4.43□□□□□ -1.7
RAD3P06839 ISY1YJR050W 708 nt4.43□□□□□ -1.7
RAD3P06839 GSH2YOL049W 1476 nt4.43□□□□□ -1.7
RAD3P06839 KIN28YDL108W 921 nt4.42□□□□□ -1.7
RAD3P06839 SOL4YGR248W 768 nt4.42□□□□□ -1.7
RAD3P06839 NVJ1YHR195W 966 nt4.42□□□□□ -1.7
RAD3P06839 YIL014C-AYIL014C-A 315 nt4.42□□□□□ -1.7
RAD3P06839 SRB6YBR253W 366 nt4.42□□□□□ -1.7
RAD3P06839 ATG2YNL242W 4779 nt4.42□□□□□ -1.7
RAD3P06839 EMP47YFL048C 1338 nt4.42□□□□□ -1.7
RAD3P06839 PDR12YPL058C 4536 nt4.42□□□□□ -1.7
RAD3P06839 TDA11YHR159W 1515 nt4.41□□□□□ -1.7
RAD3P06839 TRE1YPL176C 2352 nt4.41□□□□□ -1.7
RAD3P06839 COQ4YDR204W 1008 nt4.41□□□□□ -1.7
RAD3P06839 ARC1YGL105W 1131 nt4.41□□□□□ -1.7
RAD3P06839 PFK1YGR240C 2964 nt4.41□□□□□ -1.7
RAD3P06839 tS(AGA)D3tS(AGA)D3 83 nt4.41□□□□□ -1.7
RAD3P06839 YLR157W-DYLR157W-D 213 nt4.41□□□□□ -1.7
RAD3P06839 DCS2YOR173W 1062 nt4.41□□□□□ -1.7
RAD3P06839 DIT1YDR403W 1611 nt4.41□□□□□ -1.7
RAD3P06839 HUL4YJR036C 2679 nt4.41□□□□□ -1.7
RAD3P06839 STB2YMR053C 2553 nt4.41□□□□□ -1.7
RAD3P06839 ARG4YHR018C 1392 nt4.4□□□□□ -1.7
RAD3P06839 YTM1YOR272W 1383 nt4.4□□□□□ -1.7
RAD3P06839 SPR28YDR218C 1272 nt4.4□□□□□ -1.71
RAD3P06839 UBC8YEL012W 657 nt4.4□□□□□ -1.71
RAD3P06839 RAD27YKL113C 1149 nt4.4□□□□□ -1.71
RAD3P06839 CNB1YKL190W 528 nt4.4□□□□□ -1.71
RAD3P06839 TPA1YER049W 1935 nt4.4□□□□□ -1.71
RAD3P06839 YMR221CYMR221C 1515 nt4.4□□□□□ -1.71
RAD3P06839 RPN5YDL147W 1338 nt4.4□□□□□ -1.71
RAD3P06839 NNK1YKL171W 2787 nt4.4□□□□□ -1.71
RAD3P06839 FMP25YLR077W 1752 nt4.4□□□□□ -1.71
RAD3P06839 MTR10YOR160W 2919 nt4.39□□□□□ -1.71
RAD3P06839 THI13YDL244W 1023 nt4.39□□□□□ -1.71
RAD3P06839 THI11YJR156C 1023 nt4.39□□□□□ -1.71
RAD3P06839 CUS2YNL286W 858 nt4.39□□□□□ -1.71
RAD3P06839 PBN1YCL052C 1251 nt4.39□□□□□ -1.71
RAD3P06839 BIK1YCL029C 1323 nt4.39□□□□□ -1.71
RAD3P06839 ABP140YOR239W 1887 nt4.39□□□□□ -1.71
RAD3P06839 OMS1YDR316W 1416 nt4.38□□□□□ -1.71
RAD3P06839 RPS13YDR064W 456 nt4.38□□□□□ -1.71
RAD3P06839 YEL009C-AYEL009C-A 408 nt4.38□□□□□ -1.71
RAD3P06839 TIP20YGL145W 2106 nt4.38□□□□□ -1.71
RAD3P06839 LOH1YJL038C 660 nt4.38□□□□□ -1.71
RAD3P06839 TAF11YML015C 1041 nt4.38□□□□□ -1.71
RAD3P06839 MET12YPL023C 1974 nt4.38□□□□□ -1.71
RAD3P06839 ECM32YER176W 3366 nt4.37□□□□□ -1.71
RAD3P06839 FOX2YKR009C 2703 nt4.37□□□□□ -1.71
RAD3P06839 AI5_BETAQ0075 1065 nt4.37□□□□□ -1.71
RAD3P06839 RPS4BYHR203C 786 nt4.37□□□□□ -1.71
RAD3P06839 RPS4AYJR145C 786 nt4.37□□□□□ -1.71
RAD3P06839 IES3YLR052W 753 nt4.37□□□□□ -1.71
RAD3P06839 YOL035CYOL035C 303 nt4.37□□□□□ -1.71
RAD3P06839 YOR379CYOR379C 339 nt4.37□□□□□ -1.71
RAD3P06839 HIS4YCL030C 2400 nt4.37□□□□□ -1.71
RAD3P06839 SBE2YDR351W 2595 nt4.36□□□□□ -1.71
RAD3P06839 VPS45YGL095C 1734 nt4.36□□□□□ -1.71
RAD3P06839 SNM1YDR478W 597 nt4.36□□□□□ -1.71
RAD3P06839 YGR011WYGR011W 327 nt4.36□□□□□ -1.71
RAD3P06839 GVP36YIL041W 981 nt4.36□□□□□ -1.71
RAD3P06839 TIP41YPR040W 1071 nt4.36□□□□□ -1.71
RAD3P06839 SKM1YOL113W 1968 nt4.36□□□□□ -1.71
RAD3P06839 ADP1YCR011C 3150 nt4.35□□□□□ -1.71
RAD3P06839 YDL109CYDL109C 1944 nt4.35□□□□□ -1.71
RAD3P06839 DSC2YOL073C 969 nt4.35□□□□□ -1.71
RAD3P06839 STP22YCL008C 1158 nt4.35□□□□□ -1.71
RAD3P06839 ADY3YDL239C 2373 nt4.34□□□□□ -1.71
RAD3P06839 GDH2YDL215C 3279 nt4.34□□□□□ -1.71
RAD3P06839 YJR112W-AYJR112W-A 330 nt4.34□□□□□ -1.71
RAD3P06839 YBR196C-BYBR196C-B 105 nt4.34□□□□□ -1.71
RAD3P06839 SEO1YAL067C 1782 nt4.34□□□□□ -1.71
RAD3P06839 MEF2YJL102W 2460 nt4.34□□□□□ -1.72
RAD3P06839 KIN2YLR096W 3444 nt4.33□□□□□ -1.72
RAD3P06839 BUD8YLR353W 1812 nt4.33□□□□□ -1.72
RAD3P06839 OCA4YCR095C 1089 nt4.33□□□□□ -1.72
RAD3P06839 tQ(UUG)CtQ(UUG)C 72 nt4.33□□□□□ -1.72
RAD3P06839 tQ(UUG)D1tQ(UUG)D1 72 nt4.33□□□□□ -1.72
RAD3P06839 tQ(UUG)D2tQ(UUG)D2 72 nt4.33□□□□□ -1.72
RAD3P06839 tQ(UUG)D3tQ(UUG)D3 72 nt4.33□□□□□ -1.72
RAD3P06839 tQ(UUG)E1tQ(UUG)E1 72 nt4.33□□□□□ -1.72
RAD3P06839 tQ(UUG)HtQ(UUG)H 72 nt4.33□□□□□ -1.72
RAD3P06839 tQ(UUG)LtQ(UUG)L 72 nt4.33□□□□□ -1.72
RAD3P06839 YGR291CYGR291C 222 nt4.33□□□□□ -1.72
RAD3P06839 AST1YBL069W 1290 nt4.33□□□□□ -1.72
RAD3P06839 REX4YOL080C 870 nt4.33□□□□□ -1.72
RAD3P06839 MRM1YOR201C 1239 nt4.33□□□□□ -1.72
RAD3P06839 YBR298C-AYBR298C-A 222 nt4.33□□□□□ -1.72
RAD3P06839 RER1YCL001W 567 nt4.33□□□□□ -1.72
RAD3P06839 SNF2YOR290C 5112 nt4.33□□□□□ -1.72
RAD3P06839 OSH2YDL019C 3852 nt4.32□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms