Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC1P02654 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.61■□□□□ 0.73
APOC1P02654 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC1P02654 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC1P02654 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.61■□□□□ 0.73
APOC1P02654 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC1P02654 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC1P02654 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.61■□□□□ 0.73
APOC1P02654 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
APOC1P02654 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.61■□□□□ 0.73
APOC1P02654 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.61■□□□□ 0.73
APOC1P02654 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.61■□□□□ 0.73
APOC1P02654 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APOC1P02654 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
APOC1P02654 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOC1P02654 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
APOC1P02654 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
APOC1P02654 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOC1P02654 AC005703.6-201ENST00000623265 1329 ntBASIC19.6■□□□□ 0.73
APOC1P02654 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOC1P02654 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.6■□□□□ 0.73
APOC1P02654 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.6■□□□□ 0.73
APOC1P02654 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.6■□□□□ 0.73
APOC1P02654 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.6■□□□□ 0.73
APOC1P02654 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APOC1P02654 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
APOC1P02654 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOC1P02654 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APOC1P02654 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOC1P02654 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOC1P02654 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOC1P02654 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.59■□□□□ 0.73
APOC1P02654 KRT125P-201ENST00000546827 989 ntBASIC19.59■□□□□ 0.73
APOC1P02654 Z92544.1-202ENST00000571933 1220 ntBASIC19.59■□□□□ 0.73
APOC1P02654 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOC1P02654 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOC1P02654 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOC1P02654 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
APOC1P02654 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APOC1P02654 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APOC1P02654 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APOC1P02654 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.58■□□□□ 0.73
APOC1P02654 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
APOC1P02654 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APOC1P02654 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.58■□□□□ 0.72
APOC1P02654 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
APOC1P02654 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APOC1P02654 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
APOC1P02654 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APOC1P02654 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APOC1P02654 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
APOC1P02654 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.58■□□□□ 0.72
APOC1P02654 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
APOC1P02654 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.58■□□□□ 0.72
APOC1P02654 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APOC1P02654 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APOC1P02654 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APOC1P02654 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
APOC1P02654 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
APOC1P02654 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.57■□□□□ 0.72
APOC1P02654 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.57■□□□□ 0.72
APOC1P02654 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APOC1P02654 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APOC1P02654 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APOC1P02654 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.57■□□□□ 0.72
APOC1P02654 AC079630.1-202ENST00000618127 1840 ntBASIC19.57■□□□□ 0.72
APOC1P02654 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APOC1P02654 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
APOC1P02654 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOC1P02654 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.56■□□□□ 0.72
APOC1P02654 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
APOC1P02654 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
APOC1P02654 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.56■□□□□ 0.72
APOC1P02654 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOC1P02654 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.56■□□□□ 0.72
APOC1P02654 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.56■□□□□ 0.72
APOC1P02654 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.56■□□□□ 0.72
APOC1P02654 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.56■□□□□ 0.72
APOC1P02654 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.56■□□□□ 0.72
APOC1P02654 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.56■□□□□ 0.72
APOC1P02654 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
APOC1P02654 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOC1P02654 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOC1P02654 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOC1P02654 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOC1P02654 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.55■□□□□ 0.72
APOC1P02654 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOC1P02654 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
APOC1P02654 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.55■□□□□ 0.72
APOC1P02654 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.55■□□□□ 0.72
APOC1P02654 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.55■□□□□ 0.72
APOC1P02654 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOC1P02654 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
APOC1P02654 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOC1P02654 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOC1P02654 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
APOC1P02654 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.54■□□□□ 0.72
APOC1P02654 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
APOC1P02654 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOC1P02654 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms