Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TGFAP01135 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TGFAP01135 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TGFAP01135 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
TGFAP01135 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TGFAP01135 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TGFAP01135 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TGFAP01135 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TGFAP01135 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TGFAP01135 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TGFAP01135 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.41■□□□□ 0.54
TGFAP01135 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TGFAP01135 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TGFAP01135 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TGFAP01135 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.4■□□□□ 0.54
TGFAP01135 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TGFAP01135 AC004911.1-201ENST00000416316 871 ntBASIC18.4■□□□□ 0.54
TGFAP01135 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.4■□□□□ 0.54
TGFAP01135 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.4■□□□□ 0.54
TGFAP01135 AL499627.2-201ENST00000606283 725 ntBASIC18.4■□□□□ 0.54
TGFAP01135 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TGFAP01135 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TGFAP01135 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TGFAP01135 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.4■□□□□ 0.54
TGFAP01135 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TGFAP01135 AP003733.4-201ENST00000623785 1697 ntBASIC18.4■□□□□ 0.54
TGFAP01135 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TGFAP01135 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TGFAP01135 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.39■□□□□ 0.54
TGFAP01135 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TGFAP01135 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TGFAP01135 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TGFAP01135 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TGFAP01135 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TGFAP01135 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.39■□□□□ 0.53
TGFAP01135 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.39■□□□□ 0.53
TGFAP01135 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.39■□□□□ 0.53
TGFAP01135 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TGFAP01135 CCDC92B-201ENST00000575506 885 ntBASIC18.39■□□□□ 0.53
TGFAP01135 AC010525.1-201ENST00000585559 441 ntBASIC18.39■□□□□ 0.53
TGFAP01135 AC022211.4-201ENST00000625094 2161 ntBASIC18.39■□□□□ 0.53
TGFAP01135 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TGFAP01135 FP325331.1-202ENST00000623531 1380 ntBASIC18.39■□□□□ 0.53
TGFAP01135 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TGFAP01135 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TGFAP01135 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.38■□□□□ 0.53
TGFAP01135 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TGFAP01135 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGFAP01135 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.38■□□□□ 0.53
TGFAP01135 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TGFAP01135 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.38■□□□□ 0.53
TGFAP01135 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.38■□□□□ 0.53
TGFAP01135 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.38■□□□□ 0.53
TGFAP01135 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TGFAP01135 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.38■□□□□ 0.53
TGFAP01135 NTF6G-201ENST00000591094 616 ntBASIC18.38■□□□□ 0.53
TGFAP01135 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.38■□□□□ 0.53
TGFAP01135 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGFAP01135 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TGFAP01135 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGFAP01135 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TGFAP01135 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.37■□□□□ 0.53
TGFAP01135 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.37■□□□□ 0.53
TGFAP01135 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFAP01135 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFAP01135 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFAP01135 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.37■□□□□ 0.53
TGFAP01135 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TGFAP01135 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
TGFAP01135 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.37■□□□□ 0.53
TGFAP01135 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGFAP01135 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.37■□□□□ 0.53
TGFAP01135 AC092437.1-201ENST00000624794 1048 ntBASIC18.37■□□□□ 0.53
TGFAP01135 LINC02228-203ENST00000641970 1355 ntBASIC18.37■□□□□ 0.53
TGFAP01135 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGFAP01135 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFAP01135 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.37■□□□□ 0.53
TGFAP01135 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGFAP01135 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGFAP01135 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.37■□□□□ 0.53
TGFAP01135 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGFAP01135 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.36■□□□□ 0.53
TGFAP01135 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TGFAP01135 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGFAP01135 KRT18P14-201ENST00000534205 1250 ntBASIC18.36■□□□□ 0.53
TGFAP01135 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.36■□□□□ 0.53
TGFAP01135 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.36■□□□□ 0.53
TGFAP01135 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TGFAP01135 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGFAP01135 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.35■□□□□ 0.53
TGFAP01135 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
TGFAP01135 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.35■□□□□ 0.53
TGFAP01135 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TGFAP01135 OR2I1P-207ENST00000453522 948 ntBASIC18.35■□□□□ 0.53
TGFAP01135 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TGFAP01135 DUX4L4-201ENST00000566884 1269 ntBASIC18.35■□□□□ 0.53
TGFAP01135 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TGFAP01135 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TGFAP01135 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TGFAP01135 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms