Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
LTN1O94822 NT5C3AP1-201ENST00000394500 1012 ntBASIC30.08■■■□□ 2.41
LTN1O94822 TMEM202-AS1-202ENST00000565181 2325 ntBASIC30.08■■■□□ 2.41
LTN1O94822 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.08■■■□□ 2.41
LTN1O94822 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
LTN1O94822 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
LTN1O94822 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
LTN1O94822 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
LTN1O94822 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
LTN1O94822 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.07■■■□□ 2.4
LTN1O94822 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC30.07■■■□□ 2.4
LTN1O94822 AC135731.1-201ENST00000569415 2548 ntBASIC30.07■■■□□ 2.4
LTN1O94822 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC30.07■■■□□ 2.4
LTN1O94822 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC30.07■■■□□ 2.4
LTN1O94822 AC138932.3-201ENST00000567634 1902 ntBASIC30.07■■■□□ 2.4
LTN1O94822 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC30.07■■■□□ 2.4
LTN1O94822 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
LTN1O94822 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LTN1O94822 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
LTN1O94822 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
LTN1O94822 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
LTN1O94822 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
LTN1O94822 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
LTN1O94822 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC30.05■■■□□ 2.4
LTN1O94822 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
LTN1O94822 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
LTN1O94822 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC30.05■■■□□ 2.4
LTN1O94822 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC30.05■■■□□ 2.4
LTN1O94822 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
LTN1O94822 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC30.05■■■□□ 2.4
LTN1O94822 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC30.05■■■□□ 2.4
LTN1O94822 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
LTN1O94822 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
LTN1O94822 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
LTN1O94822 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC30.05■■■□□ 2.4
LTN1O94822 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
LTN1O94822 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC30.05■■■□□ 2.4
LTN1O94822 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
LTN1O94822 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
LTN1O94822 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC30.04■■■□□ 2.4
LTN1O94822 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC30.04■■■□□ 2.4
LTN1O94822 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC30.04■■■□□ 2.4
LTN1O94822 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
LTN1O94822 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC30.04■■■□□ 2.4
LTN1O94822 FP325331.1-202ENST00000623531 1380 ntBASIC30.04■■■□□ 2.4
LTN1O94822 MED17-227ENST00000640521 2047 ntTSL 5 BASIC30.04■■■□□ 2.4
LTN1O94822 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC30.03■■■□□ 2.4
LTN1O94822 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
LTN1O94822 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
LTN1O94822 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
LTN1O94822 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC30.03■■■□□ 2.4
LTN1O94822 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
LTN1O94822 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC30.03■■■□□ 2.4
LTN1O94822 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC30.03■■■□□ 2.4
LTN1O94822 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LTN1O94822 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LTN1O94822 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
LTN1O94822 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LTN1O94822 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LTN1O94822 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
LTN1O94822 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC30.02■■■□□ 2.4
LTN1O94822 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LTN1O94822 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
LTN1O94822 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC30.02■■■□□ 2.4
LTN1O94822 DUX4L4-201ENST00000566884 1269 ntBASIC30.02■■■□□ 2.4
LTN1O94822 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
LTN1O94822 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC30.01■■■□□ 2.4
LTN1O94822 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
LTN1O94822 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
LTN1O94822 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
LTN1O94822 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
LTN1O94822 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC30■■■□□ 2.39
LTN1O94822 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC30■■■□□ 2.39
LTN1O94822 KRT18P61-201ENST00000585825 1298 ntBASIC30■■■□□ 2.39
LTN1O94822 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC30■■■□□ 2.39
LTN1O94822 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC30■■■□□ 2.39
LTN1O94822 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC30■■■□□ 2.39
LTN1O94822 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC30■■■□□ 2.39
LTN1O94822 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC30■■■□□ 2.39
LTN1O94822 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.99■■■□□ 2.39
LTN1O94822 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
LTN1O94822 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
LTN1O94822 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
LTN1O94822 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC29.99■■■□□ 2.39
LTN1O94822 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC29.99■■■□□ 2.39
LTN1O94822 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC29.99■■■□□ 2.39
LTN1O94822 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
LTN1O94822 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC29.99■■■□□ 2.39
LTN1O94822 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
LTN1O94822 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
LTN1O94822 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
LTN1O94822 LHPP-203ENST00000392757 840 ntTSL 3 BASIC29.98■■■□□ 2.39
LTN1O94822 TPRG1LP1-201ENST00000598702 760 ntBASIC29.98■■■□□ 2.39
LTN1O94822 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
LTN1O94822 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC29.98■■■□□ 2.39
LTN1O94822 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC29.98■■■□□ 2.39
LTN1O94822 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
LTN1O94822 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.97■■■□□ 2.39
LTN1O94822 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
LTN1O94822 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms