Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.33■■□□□ 1.01
CPNE3O75131 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE3O75131 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.33■■□□□ 1.01
CPNE3O75131 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.33■■□□□ 1
CPNE3O75131 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPNE3O75131 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPNE3O75131 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.32■■□□□ 1
CPNE3O75131 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.32■■□□□ 1
CPNE3O75131 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE3O75131 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPNE3O75131 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.32■■□□□ 1
CPNE3O75131 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.32■■□□□ 1
CPNE3O75131 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.32■■□□□ 1
CPNE3O75131 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.32■■□□□ 1
CPNE3O75131 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE3O75131 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE3O75131 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.32■■□□□ 1
CPNE3O75131 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE3O75131 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE3O75131 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE3O75131 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE3O75131 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CPNE3O75131 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE3O75131 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE3O75131 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE3O75131 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE3O75131 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE3O75131 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE3O75131 BX842568.3-201ENST00000418104 571 ntBASIC21.31■■□□□ 1
CPNE3O75131 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.31■■□□□ 1
CPNE3O75131 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.31■■□□□ 1
CPNE3O75131 AC233992.3-201ENST00000607491 485 ntBASIC21.31■■□□□ 1
CPNE3O75131 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPNE3O75131 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE3O75131 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.31■■□□□ 1
CPNE3O75131 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE3O75131 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE3O75131 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE3O75131 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
CPNE3O75131 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.3■■□□□ 1
CPNE3O75131 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.3■■□□□ 1
CPNE3O75131 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPNE3O75131 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.3■■□□□ 1
CPNE3O75131 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.3■■□□□ 1
CPNE3O75131 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CPNE3O75131 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPNE3O75131 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPNE3O75131 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CPNE3O75131 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CPNE3O75131 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPNE3O75131 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CPNE3O75131 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
CPNE3O75131 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPNE3O75131 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.29■■□□□ 1
CPNE3O75131 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPNE3O75131 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.29■■□□□ 1
CPNE3O75131 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.29■■□□□ 1
CPNE3O75131 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CPNE3O75131 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPNE3O75131 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPNE3O75131 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CPNE3O75131 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPNE3O75131 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CPNE3O75131 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.29■■□□□ 1
CPNE3O75131 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPNE3O75131 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPNE3O75131 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
CPNE3O75131 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.28■■□□□ 1
CPNE3O75131 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CPNE3O75131 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.28■■□□□ 1
CPNE3O75131 AC012676.1-201ENST00000574705 1949 ntBASIC21.28■■□□□ 1
CPNE3O75131 AC026271.2-201ENST00000428091 497 ntBASIC21.28■■□□□ 1
CPNE3O75131 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.28■■□□□ 1
CPNE3O75131 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.28■■□□□ 1
CPNE3O75131 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.28■■□□□ 1
CPNE3O75131 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPNE3O75131 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.28■■□□□ 1
CPNE3O75131 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPNE3O75131 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CPNE3O75131 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPNE3O75131 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CPNE3O75131 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CPNE3O75131 AL139125.2-201ENST00000623134 1869 ntBASIC21.27■■□□□ 1
CPNE3O75131 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CPNE3O75131 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.27■■□□□ 1
CPNE3O75131 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.27■■□□□ 1
CPNE3O75131 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.27■■□□□ 1
CPNE3O75131 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CPNE3O75131 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CPNE3O75131 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CPNE3O75131 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.26■□□□□ 0.99
CPNE3O75131 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CPNE3O75131 MIR5787-201ENST00000611784 55 ntBASIC21.26■□□□□ 0.99
CPNE3O75131 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPNE3O75131 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CPNE3O75131 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.26■□□□□ 0.99
CPNE3O75131 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE3O75131 CLDN5-201ENST00000403084 2357 ntBASIC21.25■□□□□ 0.99
CPNE3O75131 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
CPNE3O75131 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms