Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKX2-8O15522 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.8■□□□□ 0.92
NKX2-8O15522 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKX2-8O15522 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.8■□□□□ 0.92
NKX2-8O15522 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.8■□□□□ 0.92
NKX2-8O15522 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.8■□□□□ 0.92
NKX2-8O15522 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NKX2-8O15522 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKX2-8O15522 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-8O15522 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-8O15522 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-8O15522 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.79■□□□□ 0.92
NKX2-8O15522 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-8O15522 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.79■□□□□ 0.92
NKX2-8O15522 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-8O15522 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.79■□□□□ 0.92
NKX2-8O15522 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NKX2-8O15522 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NKX2-8O15522 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.79■□□□□ 0.92
NKX2-8O15522 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKX2-8O15522 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.79■□□□□ 0.92
NKX2-8O15522 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX2-8O15522 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.78■□□□□ 0.92
NKX2-8O15522 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.78■□□□□ 0.92
NKX2-8O15522 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NKX2-8O15522 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX2-8O15522 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX2-8O15522 FP325331.1-202ENST00000623531 1380 ntBASIC20.78■□□□□ 0.92
NKX2-8O15522 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX2-8O15522 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX2-8O15522 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.78■□□□□ 0.92
NKX2-8O15522 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX2-8O15522 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.78■□□□□ 0.92
NKX2-8O15522 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NKX2-8O15522 DUX4L4-201ENST00000566884 1269 ntBASIC20.78■□□□□ 0.92
NKX2-8O15522 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
NKX2-8O15522 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.78■□□□□ 0.92
NKX2-8O15522 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NKX2-8O15522 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.78■□□□□ 0.92
NKX2-8O15522 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.78■□□□□ 0.92
NKX2-8O15522 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX2-8O15522 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.77■□□□□ 0.92
NKX2-8O15522 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NKX2-8O15522 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX2-8O15522 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.77■□□□□ 0.92
NKX2-8O15522 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.77■□□□□ 0.92
NKX2-8O15522 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NKX2-8O15522 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.77■□□□□ 0.92
NKX2-8O15522 AC105233.4-201ENST00000642045 216 ntBASIC20.77■□□□□ 0.92
NKX2-8O15522 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
NKX2-8O15522 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NKX2-8O15522 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.77■□□□□ 0.91
NKX2-8O15522 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NKX2-8O15522 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NKX2-8O15522 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-8O15522 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-8O15522 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NKX2-8O15522 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.76■□□□□ 0.91
NKX2-8O15522 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.76■□□□□ 0.91
NKX2-8O15522 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-8O15522 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-8O15522 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-8O15522 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NKX2-8O15522 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.76■□□□□ 0.91
NKX2-8O15522 AP005435.1-201ENST00000529293 1178 ntBASIC20.76■□□□□ 0.91
NKX2-8O15522 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-8O15522 AC022211.4-201ENST00000625094 2161 ntBASIC20.76■□□□□ 0.91
NKX2-8O15522 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-8O15522 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.76■□□□□ 0.91
NKX2-8O15522 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NKX2-8O15522 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-8O15522 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-8O15522 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-8O15522 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-8O15522 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-8O15522 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-8O15522 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.75■□□□□ 0.91
NKX2-8O15522 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.75■□□□□ 0.91
NKX2-8O15522 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.75■□□□□ 0.91
NKX2-8O15522 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.75■□□□□ 0.91
NKX2-8O15522 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-8O15522 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.74■□□□□ 0.91
NKX2-8O15522 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.74■□□□□ 0.91
NKX2-8O15522 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.74■□□□□ 0.91
NKX2-8O15522 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-8O15522 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-8O15522 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-8O15522 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-8O15522 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-8O15522 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-8O15522 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.73■□□□□ 0.91
NKX2-8O15522 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-8O15522 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.73■□□□□ 0.91
NKX2-8O15522 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
NKX2-8O15522 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-8O15522 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-8O15522 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-8O15522 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-8O15522 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-8O15522 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms