Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
VGFO15240 LHPP-203ENST00000392757 840 ntTSL 3 BASIC31.99■■■□□ 2.71
VGFO15240 TERF1P2-201ENST00000583350 1212 ntBASIC31.99■■■□□ 2.71
VGFO15240 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC31.99■■■□□ 2.71
VGFO15240 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC31.99■■■□□ 2.71
VGFO15240 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
VGFO15240 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
VGFO15240 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
VGFO15240 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VGFO15240 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VGFO15240 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC31.98■■■□□ 2.71
VGFO15240 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC31.98■■■□□ 2.71
VGFO15240 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
VGFO15240 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC31.98■■■□□ 2.71
VGFO15240 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VGFO15240 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VGFO15240 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
VGFO15240 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
VGFO15240 AC144652.1-201ENST00000609974 1624 ntBASIC31.97■■■□□ 2.71
VGFO15240 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
VGFO15240 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC31.97■■■□□ 2.71
VGFO15240 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
VGFO15240 LINC01529-204ENST00000636474 1715 ntBASIC31.97■■■□□ 2.71
VGFO15240 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC31.97■■■□□ 2.71
VGFO15240 LINC02228-203ENST00000641970 1355 ntBASIC31.96■■■□□ 2.71
VGFO15240 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC31.96■■■□□ 2.71
VGFO15240 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
VGFO15240 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
VGFO15240 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
VGFO15240 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
VGFO15240 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC31.95■■■□□ 2.71
VGFO15240 KRT18P14-201ENST00000534205 1250 ntBASIC31.95■■■□□ 2.71
VGFO15240 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.7
VGFO15240 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
VGFO15240 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.95■■■□□ 2.7
VGFO15240 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
VGFO15240 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
VGFO15240 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
VGFO15240 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC31.94■■■□□ 2.7
VGFO15240 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
VGFO15240 NTF6G-201ENST00000591094 616 ntBASIC31.94■■■□□ 2.7
VGFO15240 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
VGFO15240 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
VGFO15240 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
VGFO15240 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
VGFO15240 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
VGFO15240 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
VGFO15240 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC31.93■■■□□ 2.7
VGFO15240 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC31.93■■■□□ 2.7
VGFO15240 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC31.93■■■□□ 2.7
VGFO15240 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
VGFO15240 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VGFO15240 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VGFO15240 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC31.92■■■□□ 2.7
VGFO15240 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VGFO15240 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VGFO15240 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VGFO15240 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC31.92■■■□□ 2.7
VGFO15240 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VGFO15240 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
VGFO15240 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC31.92■■■□□ 2.7
VGFO15240 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VGFO15240 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VGFO15240 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
VGFO15240 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VGFO15240 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VGFO15240 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
VGFO15240 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC31.91■■■□□ 2.7
VGFO15240 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC31.91■■■□□ 2.7
VGFO15240 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC31.91■■■□□ 2.7
VGFO15240 MPST-204ENST00000404393 1329 ntTSL 5 BASIC31.91■■■□□ 2.7
VGFO15240 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC31.91■■■□□ 2.7
VGFO15240 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
VGFO15240 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC31.9■■■□□ 2.7
VGFO15240 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
VGFO15240 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC31.9■■■□□ 2.7
VGFO15240 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
VGFO15240 STX4-202ENST00000394998 1498 ntTSL 2 BASIC31.9■■■□□ 2.7
VGFO15240 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.9■■■□□ 2.7
VGFO15240 AC142381.3-201ENST00000568208 1670 ntBASIC31.89■■■□□ 2.7
VGFO15240 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC31.89■■■□□ 2.7
VGFO15240 AC138932.3-201ENST00000567634 1902 ntBASIC31.89■■■□□ 2.7
VGFO15240 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC31.89■■■□□ 2.7
VGFO15240 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
VGFO15240 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
VGFO15240 AC004911.1-201ENST00000416316 871 ntBASIC31.89■■■□□ 2.7
VGFO15240 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC31.89■■■□□ 2.7
VGFO15240 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
VGFO15240 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
VGFO15240 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.89■■■□□ 2.7
VGFO15240 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
VGFO15240 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
VGFO15240 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
VGFO15240 GXYLT1P2-201ENST00000433312 1230 ntBASIC31.88■■■□□ 2.69
VGFO15240 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC31.88■■■□□ 2.69
VGFO15240 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
VGFO15240 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC31.88■■■□□ 2.69
VGFO15240 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
VGFO15240 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
VGFO15240 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms