Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.95■□□□□ 0.94
PRAMEF25A6NGN4 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.95■□□□□ 0.94
PRAMEF25A6NGN4 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.95■□□□□ 0.94
PRAMEF25A6NGN4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF25A6NGN4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF25A6NGN4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.94■□□□□ 0.94
PRAMEF25A6NGN4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF25A6NGN4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.94■□□□□ 0.94
PRAMEF25A6NGN4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
PRAMEF25A6NGN4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF25A6NGN4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.94■□□□□ 0.94
PRAMEF25A6NGN4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF25A6NGN4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF25A6NGN4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF25A6NGN4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF25A6NGN4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF25A6NGN4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF25A6NGN4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PRAMEF25A6NGN4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF25A6NGN4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF25A6NGN4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.92■□□□□ 0.94
PRAMEF25A6NGN4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.92■□□□□ 0.94
PRAMEF25A6NGN4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF25A6NGN4 AC005703.6-201ENST00000623265 1329 ntBASIC20.92■□□□□ 0.94
PRAMEF25A6NGN4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF25A6NGN4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.92■□□□□ 0.94
PRAMEF25A6NGN4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF25A6NGN4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF25A6NGN4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF25A6NGN4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF25A6NGN4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF25A6NGN4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF25A6NGN4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.91■□□□□ 0.94
PRAMEF25A6NGN4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.91■□□□□ 0.94
PRAMEF25A6NGN4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF25A6NGN4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PRAMEF25A6NGN4 AC131212.1-201ENST00000613771 668 ntBASIC20.91■□□□□ 0.94
PRAMEF25A6NGN4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PRAMEF25A6NGN4 LINC00565-201ENST00000562710 2331 ntBASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF25A6NGN4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRAMEF25A6NGN4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRAMEF25A6NGN4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.89■□□□□ 0.94
PRAMEF25A6NGN4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRAMEF25A6NGN4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRAMEF25A6NGN4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.89■□□□□ 0.93
PRAMEF25A6NGN4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.89■□□□□ 0.93
PRAMEF25A6NGN4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF25A6NGN4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.89■□□□□ 0.93
PRAMEF25A6NGN4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.89■□□□□ 0.93
PRAMEF25A6NGN4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF25A6NGN4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 GUSBP5-202ENST00000510805 1989 ntBASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 AL117332.1-201ENST00000622628 974 ntBASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF25A6NGN4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF25A6NGN4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRAMEF25A6NGN4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF25A6NGN4 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEF25A6NGN4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEF25A6NGN4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF25A6NGN4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEF25A6NGN4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF25A6NGN4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.86■□□□□ 0.93
PRAMEF25A6NGN4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms