Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H12DA2A288 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
ZC3H12DA2A288 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H12DA2A288 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H12DA2A288 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H12DA2A288 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H12DA2A288 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H12DA2A288 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H12DA2A288 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ZC3H12DA2A288 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.37■□□□□ 0.85
ZC3H12DA2A288 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H12DA2A288 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H12DA2A288 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 AC079630.1-202ENST00000618127 1840 ntBASIC20.36■□□□□ 0.85
ZC3H12DA2A288 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H12DA2A288 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H12DA2A288 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H12DA2A288 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.35■□□□□ 0.85
ZC3H12DA2A288 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ZC3H12DA2A288 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H12DA2A288 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H12DA2A288 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.35■□□□□ 0.85
ZC3H12DA2A288 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H12DA2A288 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ZC3H12DA2A288 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H12DA2A288 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 KRT16P3-201ENST00000439127 1283 ntBASIC20.34■□□□□ 0.85
ZC3H12DA2A288 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H12DA2A288 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H12DA2A288 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ZC3H12DA2A288 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H12DA2A288 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.33■□□□□ 0.85
ZC3H12DA2A288 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H12DA2A288 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ZC3H12DA2A288 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H12DA2A288 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.33■□□□□ 0.84
ZC3H12DA2A288 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H12DA2A288 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ZC3H12DA2A288 CLDN5-201ENST00000403084 2357 ntBASIC20.32■□□□□ 0.84
ZC3H12DA2A288 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.32■□□□□ 0.84
ZC3H12DA2A288 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H12DA2A288 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ZC3H12DA2A288 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
ZC3H12DA2A288 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.32■□□□□ 0.84
ZC3H12DA2A288 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.32■□□□□ 0.84
ZC3H12DA2A288 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ZC3H12DA2A288 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H12DA2A288 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H12DA2A288 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H12DA2A288 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 MIR6724-1-201ENST00000616420 92 ntBASIC20.31■□□□□ 0.84
ZC3H12DA2A288 MIR6724-2-201ENST00000616483 92 ntBASIC20.31■□□□□ 0.84
ZC3H12DA2A288 MIR6724-4-201ENST00000617390 92 ntBASIC20.31■□□□□ 0.84
ZC3H12DA2A288 MIR6724-3-201ENST00000622482 92 ntBASIC20.31■□□□□ 0.84
ZC3H12DA2A288 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ZC3H12DA2A288 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ZC3H12DA2A288 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H12DA2A288 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ZC3H12DA2A288 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms