Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.97■□□□□ 0.95
TCRBV3S1A0A5B6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.97■□□□□ 0.95
TCRBV3S1A0A5B6 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.97■□□□□ 0.95
TCRBV3S1A0A5B6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TCRBV3S1A0A5B6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV3S1A0A5B6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.97■□□□□ 0.95
TCRBV3S1A0A5B6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.97■□□□□ 0.95
TCRBV3S1A0A5B6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TCRBV3S1A0A5B6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.97■□□□□ 0.95
TCRBV3S1A0A5B6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV3S1A0A5B6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV3S1A0A5B6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV3S1A0A5B6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV3S1A0A5B6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV3S1A0A5B6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV3S1A0A5B6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TCRBV3S1A0A5B6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV3S1A0A5B6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV3S1A0A5B6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV3S1A0A5B6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV3S1A0A5B6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV3S1A0A5B6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TCRBV3S1A0A5B6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV3S1A0A5B6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.95■□□□□ 0.94
TCRBV3S1A0A5B6 AL353803.4-201ENST00000565882 1934 ntBASIC20.95■□□□□ 0.94
TCRBV3S1A0A5B6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TCRBV3S1A0A5B6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 ABHD17AP4-201ENST00000411545 909 ntBASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV3S1A0A5B6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV3S1A0A5B6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV3S1A0A5B6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV3S1A0A5B6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV3S1A0A5B6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV3S1A0A5B6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.93■□□□□ 0.94
TCRBV3S1A0A5B6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV3S1A0A5B6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV3S1A0A5B6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBV3S1A0A5B6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.93■□□□□ 0.94
TCRBV3S1A0A5B6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TCRBV3S1A0A5B6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV3S1A0A5B6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV3S1A0A5B6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV3S1A0A5B6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV3S1A0A5B6 FAM99A-202ENST00000538190 1989 ntBASIC20.92■□□□□ 0.94
TCRBV3S1A0A5B6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TCRBV3S1A0A5B6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV3S1A0A5B6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 AC009831.1-201ENST00000580420 1582 ntBASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV3S1A0A5B6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 AC010542.4-201ENST00000563151 1910 ntBASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV3S1A0A5B6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.89■□□□□ 0.94
TCRBV3S1A0A5B6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
TCRBV3S1A0A5B6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TCRBV3S1A0A5B6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TCRBV3S1A0A5B6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TCRBV3S1A0A5B6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TCRBV3S1A0A5B6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.89■□□□□ 0.93
TCRBV3S1A0A5B6 AC087393.1-201ENST00000582896 145 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms