Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-1A0A0K0K1D8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV6-1A0A0K0K1D8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-1A0A0K0K1D8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-1A0A0K0K1D8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-1A0A0K0K1D8 MIR6765-201ENST00000614092 87 ntBASIC16.73■□□□□ 0.27
TRBV6-1A0A0K0K1D8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-1A0A0K0K1D8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRBV6-1A0A0K0K1D8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV6-1A0A0K0K1D8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV6-1A0A0K0K1D8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 FBXW4P1-201ENST00000426721 2239 ntBASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 GPX1-201ENST00000419349 1106 ntBASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 SPCS2P3-201ENST00000500401 656 ntBASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-1A0A0K0K1D8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-1A0A0K0K1D8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-1A0A0K0K1D8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-1A0A0K0K1D8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-1A0A0K0K1D8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-1A0A0K0K1D8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-1A0A0K0K1D8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-1A0A0K0K1D8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-1A0A0K0K1D8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-1A0A0K0K1D8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-1A0A0K0K1D8 AL137060.1-201ENST00000618151 2648 ntBASIC16.7■□□□□ 0.26
TRBV6-1A0A0K0K1D8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV6-1A0A0K0K1D8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV6-1A0A0K0K1D8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.7■□□□□ 0.26
TRBV6-1A0A0K0K1D8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-1A0A0K0K1D8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-1A0A0K0K1D8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV6-1A0A0K0K1D8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-1A0A0K0K1D8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-1A0A0K0K1D8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV6-1A0A0K0K1D8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-1A0A0K0K1D8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
TRBV6-1A0A0K0K1D8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 AL592293.1-201ENST00000502889 1188 ntBASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 AC022616.5-201ENST00000518796 181 ntBASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-1A0A0K0K1D8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 MIR7108-201ENST00000614319 87 ntBASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV6-1A0A0K0K1D8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-1A0A0K0K1D8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-1A0A0K0K1D8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRBV6-1A0A0K0K1D8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRBV6-1A0A0K0K1D8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRBV6-1A0A0K0K1D8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-1A0A0K0K1D8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRBV6-1A0A0K0K1D8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.66■□□□□ 0.26
TRBV6-1A0A0K0K1D8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms