Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LINC01702-203ENST00000635350 745 ntTSL 5 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 F2-205ENST00000530231 1849 ntTSL 5 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 AC240565.1-201ENST00000624936 1373 ntTSL 5 BASIC20.52■□□□□ 0.87
RIMBP3Q9UFD9 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
RIMBP3Q9UFD9 CHI3L2-202ENST00000369748 1468 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
RIMBP3Q9UFD9 LIPG-205ENST00000580036 1453 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RIMBP3Q9UFD9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RIMBP3Q9UFD9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
RIMBP3Q9UFD9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RIMBP3Q9UFD9 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 SETD4-202ENST00000399201 1212 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 SETD4-203ENST00000399205 1208 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 AC109779.1-202ENST00000439810 579 ntTSL 4 BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 FXYD6P2-201ENST00000444174 288 ntBASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 RN7SL743P-201ENST00000475032 298 ntBASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 CLCF1-202ENST00000533438 967 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 PA2G4-206ENST00000552766 1085 ntTSL 5 BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 HADHB-202ENST00000405867 1588 ntTSL 5 BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 SMUG1-AS1-201ENST00000634796 1734 ntTSL 5 BASIC20.51■□□□□ 0.87
RIMBP3Q9UFD9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 WISP1-201ENST00000220856 1205 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 FAM238A-201ENST00000412114 1091 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 BMF-203ENST00000431415 492 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 P2RX6P-202ENST00000450626 357 ntBASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 SELENOS-207ENST00000531964 764 ntTSL 3 BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 AL132709.1-205ENST00000556136 551 ntTSL 4 BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 SLC39A9-210ENST00000557046 855 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 AC009088.4-201ENST00000575892 280 ntBASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 AC092329.1-201ENST00000594653 574 ntTSL 5 BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 HAND2-204ENST00000621866 1337 ntTSL 5 BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 CFAP206-202ENST00000369562 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RIMBP3Q9UFD9 CST8-201ENST00000246012 890 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 AL451165.1-201ENST00000334441 328 ntBASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 PGAM1P4-201ENST00000397343 750 ntBASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 AC004000.1-201ENST00000414435 433 ntTSL 5 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 AL450063.1-201ENST00000441775 244 ntBASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 ZNF101-204ENST00000444249 1152 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 FANCD2OS-204ENST00000450660 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 ITIH4-AS1-201ENST00000478366 395 ntTSL 3 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 AP001922.3-201ENST00000524768 842 ntTSL 3 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 AC019254.1-202ENST00000558515 645 ntTSL 3 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 AC024361.1-201ENST00000572594 642 ntBASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 AC012572.1-201ENST00000581634 397 ntTSL 2 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 AC061992.1-202ENST00000587575 490 ntTSL 3 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 AL627230.7-201ENST00000613971 601 ntBASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 PAX6-217ENST00000481563 1587 ntTSL 5 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 AC006144.1-201ENST00000424220 1600 ntBASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 MTFR1L-210ENST00000474295 1873 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 SPATA22-201ENST00000268981 1280 ntTSL 2 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 SETDB1-203ENST00000368963 1045 ntTSL 5 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 CYP17A1-AS1-201ENST00000369884 491 ntTSL 2 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 HLA-DQB1-203ENST00000399082 1219 ntBASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 OR7E37P-201ENST00000421076 897 ntBASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 IL12A-205ENST00000480787 863 ntTSL 3 BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 RN7SL304P-201ENST00000488028 301 ntBASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 RAB30-203ENST00000525117 937 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RIMBP3Q9UFD9 CIAPIN1P-201ENST00000584883 931 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms