Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 HIST2H2BA-201ENST00000412169 381 ntBASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 AL354861.1-201ENST00000445213 355 ntBASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 KRT18P62-201ENST00000446618 1287 ntBASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 AC079250.1-201ENST00000456046 531 ntBASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 RPL18AP3-201ENST00000462885 528 ntBASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 EEF1GP8-201ENST00000506566 1154 ntBASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 RNA5SP406-201ENST00000516106 112 ntBASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 MIR8071-1-201ENST00000616769 65 ntBASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 MIR8071-2-201ENST00000616772 65 ntBASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 AC128714.1-201ENST00000637035 887 ntBASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 AC011491.1-203ENST00000637688 543 ntBASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 AC126335.2-201ENST00000623362 4637 ntBASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.78□□□□□ -0.36
PRICKLE4Q2TBC4 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRICKLE4Q2TBC4 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 ACTBP14-201ENST00000411655 1089 ntBASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 AC078991.1-201ENST00000437297 610 ntBASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 FTLP1-201ENST00000449155 526 ntBASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 DPY19L2P5-201ENST00000456300 331 ntBASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 RNA5SP423-201ENST00000517127 109 ntBASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 AP002803.1-201ENST00000528836 498 ntBASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 RN7SL357P-201ENST00000581065 298 ntBASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.77□□□□□ -0.37
PRICKLE4Q2TBC4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms