Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.42■□□□□ 0.06
ASIC1P78348 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.42■□□□□ 0.06
ASIC1P78348 AC008040.5-201ENST00000599781 1781 ntBASIC15.42■□□□□ 0.06
ASIC1P78348 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ASIC1P78348 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC15.42■□□□□ 0.06
ASIC1P78348 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.42■□□□□ 0.06
ASIC1P78348 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.42■□□□□ 0.06
ASIC1P78348 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 MIR557-201ENST00000385239 98 ntBASIC15.42■□□□□ 0.06
ASIC1P78348 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.42■□□□□ 0.06
ASIC1P78348 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 EEF1DP2-201ENST00000433698 843 ntBASIC15.42■□□□□ 0.06
ASIC1P78348 RN7SL67P-201ENST00000492147 296 ntBASIC15.42■□□□□ 0.06
ASIC1P78348 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.42■□□□□ 0.06
ASIC1P78348 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.42■□□□□ 0.06
ASIC1P78348 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 AC242376.1-201ENST00000559033 726 ntBASIC15.42■□□□□ 0.06
ASIC1P78348 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC15.42■□□□□ 0.06
ASIC1P78348 MIR4265-201ENST00000582152 99 ntBASIC15.42■□□□□ 0.06
ASIC1P78348 SIGLEC22P-201ENST00000599104 714 ntBASIC15.42■□□□□ 0.06
ASIC1P78348 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.42■□□□□ 0.06
ASIC1P78348 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.42■□□□□ 0.06
ASIC1P78348 AC009145.4-201ENST00000625119 1294 ntBASIC15.42■□□□□ 0.06
ASIC1P78348 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.42■□□□□ 0.06
ASIC1P78348 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ASIC1P78348 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC15.42■□□□□ 0.06
ASIC1P78348 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC15.42■□□□□ 0.06
ASIC1P78348 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.42■□□□□ 0.06
ASIC1P78348 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
ASIC1P78348 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC15.42■□□□□ 0.06
ASIC1P78348 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC15.42■□□□□ 0.06
ASIC1P78348 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
ASIC1P78348 FP325330.2-201ENST00000624219 5630 ntBASIC15.42■□□□□ 0.06
ASIC1P78348 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.42■□□□□ 0.06
ASIC1P78348 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ASIC1P78348 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.41■□□□□ 0.06
ASIC1P78348 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15.41■□□□□ 0.06
ASIC1P78348 STRCP1-201ENST00000509801 5328 ntBASIC15.41■□□□□ 0.06
ASIC1P78348 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.41■□□□□ 0.06
ASIC1P78348 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ASIC1P78348 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 AC106827.1-201ENST00000366454 431 ntBASIC15.41■□□□□ 0.06
ASIC1P78348 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
ASIC1P78348 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.41■□□□□ 0.06
ASIC1P78348 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.41■□□□□ 0.06
ASIC1P78348 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.41■□□□□ 0.06
ASIC1P78348 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.41■□□□□ 0.06
ASIC1P78348 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.41■□□□□ 0.06
ASIC1P78348 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.41■□□□□ 0.06
ASIC1P78348 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.41■□□□□ 0.06
ASIC1P78348 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15.41■□□□□ 0.06
ASIC1P78348 RN7SL574P-201ENST00000581512 297 ntBASIC15.41■□□□□ 0.06
ASIC1P78348 MIR4326-201ENST00000582203 59 ntBASIC15.41■□□□□ 0.06
ASIC1P78348 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
ASIC1P78348 AL353770.1-201ENST00000614915 403 ntBASIC15.41■□□□□ 0.06
ASIC1P78348 MIR6787-201ENST00000616675 61 ntBASIC15.41■□□□□ 0.06
ASIC1P78348 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ASIC1P78348 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.41■□□□□ 0.06
ASIC1P78348 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.41■□□□□ 0.06
ASIC1P78348 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
ASIC1P78348 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.41■□□□□ 0.06
ASIC1P78348 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC15.41■□□□□ 0.06
ASIC1P78348 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ASIC1P78348 TBC1D3J-201ENST00000620719 1426 ntBASIC15.41■□□□□ 0.06
ASIC1P78348 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ASIC1P78348 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ASIC1P78348 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ASIC1P78348 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
ASIC1P78348 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.4■□□□□ 0.06
ASIC1P78348 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ASIC1P78348 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ASIC1P78348 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms