Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC1A1P43005 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC1A1P43005 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC1A1P43005 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC1A1P43005 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC1A1P43005 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC1A1P43005 RN7SL665P-201ENST00000578793 300 ntBASIC14.43□□□□□ -0.1
SLC1A1P43005 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 MIR4265-201ENST00000582152 99 ntBASIC14.43□□□□□ -0.1
SLC1A1P43005 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC1A1P43005 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC1A1P43005 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SLC1A1P43005 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SLC1A1P43005 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC1A1P43005 AL513497.1-201ENST00000624273 2083 ntBASIC14.43□□□□□ -0.1
SLC1A1P43005 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SLC1A1P43005 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 AC004899.2-201ENST00000622993 3860 ntBASIC14.42□□□□□ -0.1
SLC1A1P43005 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SLC1A1P43005 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SLC1A1P43005 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC1A1P43005 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.42□□□□□ -0.1
SLC1A1P43005 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SLC1A1P43005 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC1A1P43005 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A1P43005 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A1P43005 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A1P43005 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC1A1P43005 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 GK-202ENST00000378941 458 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC1A1P43005 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A1P43005 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A1P43005 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC1A1P43005 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SLC1A1P43005 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC1A1P43005 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC1A1P43005 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC1A1P43005 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC1A1P43005 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A1P43005 AC108725.1-201ENST00000495472 409 ntBASIC14.42□□□□□ -0.1
SLC1A1P43005 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A1P43005 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC1A1P43005 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC1A1P43005 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A1P43005 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A1P43005 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SLC1A1P43005 AL031673.1-201ENST00000611460 466 ntBASIC14.42□□□□□ -0.1
SLC1A1P43005 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC1A1P43005 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC1A1P43005 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SLC1A1P43005 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC1A1P43005 DDC-212ENST00000615193 1674 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC1A1P43005 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A1P43005 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A1P43005 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
SLC1A1P43005 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 HNRNPLP1-201ENST00000421896 1501 ntBASIC14.41□□□□□ -0.1
SLC1A1P43005 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SLC1A1P43005 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SLC1A1P43005 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SLC1A1P43005 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A1P43005 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms