Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.07□□□□□ -0.32
RAE1P78406 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RAE1P78406 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.07□□□□□ -0.32
RAE1P78406 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.07□□□□□ -0.32
RAE1P78406 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.07□□□□□ -0.32
RAE1P78406 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.07□□□□□ -0.32
RAE1P78406 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.07□□□□□ -0.32
RAE1P78406 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.07□□□□□ -0.32
RAE1P78406 MIR4525-201ENST00000580000 75 ntBASIC13.07□□□□□ -0.32
RAE1P78406 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.07□□□□□ -0.32
RAE1P78406 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC13.07□□□□□ -0.32
RAE1P78406 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
RAE1P78406 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.07□□□□□ -0.32
RAE1P78406 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
RAE1P78406 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.07□□□□□ -0.32
RAE1P78406 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.07□□□□□ -0.32
RAE1P78406 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 HNRNPLP1-201ENST00000421896 1501 ntBASIC13.07□□□□□ -0.32
RAE1P78406 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RAE1P78406 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.07□□□□□ -0.32
RAE1P78406 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RAE1P78406 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RAE1P78406 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC13.07□□□□□ -0.32
RAE1P78406 AC102953.2-201ENST00000609755 3026 ntBASIC13.07□□□□□ -0.32
RAE1P78406 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.07□□□□□ -0.32
RAE1P78406 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.07□□□□□ -0.32
RAE1P78406 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 TBC1D3J-201ENST00000620719 1426 ntBASIC13.06□□□□□ -0.32
RAE1P78406 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.06□□□□□ -0.32
RAE1P78406 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.06□□□□□ -0.32
RAE1P78406 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RAE1P78406 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RAE1P78406 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RAE1P78406 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.06□□□□□ -0.32
RAE1P78406 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.06□□□□□ -0.32
RAE1P78406 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.06□□□□□ -0.32
RAE1P78406 GRPEL2P1-201ENST00000453145 339 ntBASIC13.06□□□□□ -0.32
RAE1P78406 STK24P1-201ENST00000455035 1291 ntBASIC13.06□□□□□ -0.32
RAE1P78406 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 NDUFS6P1-201ENST00000485187 316 ntBASIC13.06□□□□□ -0.32
RAE1P78406 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.06□□□□□ -0.32
RAE1P78406 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.06□□□□□ -0.32
RAE1P78406 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.06□□□□□ -0.32
RAE1P78406 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.06□□□□□ -0.32
RAE1P78406 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.06□□□□□ -0.32
RAE1P78406 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RAE1P78406 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.06□□□□□ -0.32
RAE1P78406 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 AC126335.2-201ENST00000623362 4637 ntBASIC13.06□□□□□ -0.32
RAE1P78406 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RAE1P78406 RBM22P2-201ENST00000393978 1814 ntBASIC13.06□□□□□ -0.32
RAE1P78406 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 AL513497.1-201ENST00000624273 2083 ntBASIC13.06□□□□□ -0.32
RAE1P78406 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RAE1P78406 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
RAE1P78406 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
RAE1P78406 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC13.05□□□□□ -0.32
RAE1P78406 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms