Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC23.55■■□□□ 1.36
SMARCA4P51532 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCA4P51532 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCA4P51532 IGHV3-6-201ENST00000518407 347 ntBASIC23.55■■□□□ 1.36
SMARCA4P51532 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC23.55■■□□□ 1.36
SMARCA4P51532 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC23.55■■□□□ 1.36
SMARCA4P51532 AL512631.1-201ENST00000604086 840 ntBASIC23.55■■□□□ 1.36
SMARCA4P51532 PDLIM1P1-201ENST00000604187 969 ntBASIC23.55■■□□□ 1.36
SMARCA4P51532 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC23.55■■□□□ 1.36
SMARCA4P51532 AC021683.4-201ENST00000623348 1099 ntBASIC23.55■■□□□ 1.36
SMARCA4P51532 MIEF1-215ENST00000637854 213 ntBASIC23.55■■□□□ 1.36
SMARCA4P51532 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC23.55■■□□□ 1.36
SMARCA4P51532 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC23.55■■□□□ 1.36
SMARCA4P51532 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC23.55■■□□□ 1.36
SMARCA4P51532 AC005912.2-201ENST00000619492 2400 ntBASIC23.55■■□□□ 1.36
SMARCA4P51532 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCA4P51532 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SMARCA4P51532 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC23.55■■□□□ 1.36
SMARCA4P51532 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCA4P51532 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC23.55■■□□□ 1.36
SMARCA4P51532 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC23.55■■□□□ 1.36
SMARCA4P51532 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
SMARCA4P51532 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC23.55■■□□□ 1.36
SMARCA4P51532 AC112694.1-202ENST00000540985 943 ntBASIC23.55■■□□□ 1.36
SMARCA4P51532 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC23.55■■□□□ 1.36
SMARCA4P51532 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC23.55■■□□□ 1.36
SMARCA4P51532 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC23.55■■□□□ 1.36
SMARCA4P51532 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCA4P51532 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCA4P51532 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCA4P51532 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCA4P51532 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
SMARCA4P51532 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCA4P51532 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC23.54■■□□□ 1.36
SMARCA4P51532 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCA4P51532 AC109326.1-201ENST00000624705 1321 ntBASIC23.54■■□□□ 1.36
SMARCA4P51532 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
SMARCA4P51532 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCA4P51532 AC142391.1-201ENST00000515823 1002 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SMARCA4P51532 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
SMARCA4P51532 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC23.54■■□□□ 1.36
SMARCA4P51532 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC23.54■■□□□ 1.36
SMARCA4P51532 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC23.54■■□□□ 1.36
SMARCA4P51532 C2orf27AP1-201ENST00000618128 586 ntBASIC23.54■■□□□ 1.36
SMARCA4P51532 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC23.54■■□□□ 1.36
SMARCA4P51532 AL139823.1-201ENST00000641871 1225 ntBASIC23.54■■□□□ 1.36
SMARCA4P51532 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCA4P51532 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCA4P51532 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
SMARCA4P51532 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC23.53■■□□□ 1.36
SMARCA4P51532 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCA4P51532 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC23.53■■□□□ 1.36
SMARCA4P51532 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCA4P51532 AC005089.1-201ENST00000619486 2241 ntBASIC23.53■■□□□ 1.36
SMARCA4P51532 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCA4P51532 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCA4P51532 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
SMARCA4P51532 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SMARCA4P51532 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC23.53■■□□□ 1.36
SMARCA4P51532 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCA4P51532 AL357054.1-201ENST00000407035 1227 ntBASIC23.53■■□□□ 1.36
SMARCA4P51532 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC23.53■■□□□ 1.36
SMARCA4P51532 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC23.53■■□□□ 1.36
SMARCA4P51532 RN7SL105P-201ENST00000475661 299 ntBASIC23.53■■□□□ 1.36
SMARCA4P51532 VTI1BP1-201ENST00000486325 700 ntBASIC23.53■■□□□ 1.36
SMARCA4P51532 AC069181.1-201ENST00000498256 554 ntBASIC23.53■■□□□ 1.36
SMARCA4P51532 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCA4P51532 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC23.53■■□□□ 1.36
SMARCA4P51532 BCAR1P1-201ENST00000553953 636 ntBASIC23.53■■□□□ 1.36
SMARCA4P51532 WSB1-213ENST00000583193 552 ntTSL 4 BASIC23.53■■□□□ 1.36
SMARCA4P51532 AC013472.3-201ENST00000607407 659 ntBASIC23.53■■□□□ 1.36
SMARCA4P51532 AC130469.2-201ENST00000625112 1092 ntBASIC23.53■■□□□ 1.36
SMARCA4P51532 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCA4P51532 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCA4P51532 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCA4P51532 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
SMARCA4P51532 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
SMARCA4P51532 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC23.53■■□□□ 1.36
SMARCA4P51532 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCA4P51532 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC23.53■■□□□ 1.36
SMARCA4P51532 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCA4P51532 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCA4P51532 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCA4P51532 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCA4P51532 RNA5SP248-201ENST00000365602 127 ntBASIC23.52■■□□□ 1.36
SMARCA4P51532 RNF7-202ENST00000393000 805 ntTSL 2 BASIC23.52■■□□□ 1.36
SMARCA4P51532 RN7SKP102-201ENST00000411186 315 ntBASIC23.52■■□□□ 1.36
SMARCA4P51532 GGT8P-201ENST00000418938 532 ntBASIC23.52■■□□□ 1.36
SMARCA4P51532 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC23.52■■□□□ 1.36
SMARCA4P51532 RBP5-202ENST00000542370 564 ntTSL 2 BASIC23.52■■□□□ 1.36
SMARCA4P51532 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCA4P51532 AC005336.1-201ENST00000585431 1243 ntBASIC23.52■■□□□ 1.36
SMARCA4P51532 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC23.52■■□□□ 1.36
SMARCA4P51532 AC025165.4-201ENST00000602327 433 ntBASIC23.52■■□□□ 1.36
SMARCA4P51532 AC080038.2-201ENST00000617734 423 ntBASIC23.52■■□□□ 1.36
SMARCA4P51532 UBA3-212ENST00000630585 390 ntTSL 4 BASIC23.52■■□□□ 1.36
SMARCA4P51532 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SMARCA4P51532 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC23.52■■□□□ 1.36
SMARCA4P51532 INTS4P1-203ENST00000641008 3683 ntBASIC23.52■■□□□ 1.36
SMARCA4P51532 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms