Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC16.78■□□□□ 0.28
PDE6BP35913 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PDE6BP35913 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PDE6BP35913 DUX4L31-201ENST00000446466 1136 ntBASIC16.78■□□□□ 0.28
PDE6BP35913 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 AC104115.1-201ENST00000484005 623 ntBASIC16.78■□□□□ 0.28
PDE6BP35913 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC16.78■□□□□ 0.28
PDE6BP35913 HNRNPA1P4-201ENST00000509706 756 ntBASIC16.78■□□□□ 0.28
PDE6BP35913 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC16.78■□□□□ 0.28
PDE6BP35913 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.78■□□□□ 0.28
PDE6BP35913 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC16.78■□□□□ 0.28
PDE6BP35913 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC16.78■□□□□ 0.28
PDE6BP35913 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDE6BP35913 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.78■□□□□ 0.28
PDE6BP35913 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PDE6BP35913 CICP24-201ENST00000605464 2705 ntBASIC16.77■□□□□ 0.28
PDE6BP35913 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6BP35913 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6BP35913 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PDE6BP35913 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
PDE6BP35913 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
PDE6BP35913 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6BP35913 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6BP35913 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC16.77■□□□□ 0.28
PDE6BP35913 AC015813.5-201ENST00000624641 1514 ntBASIC16.77■□□□□ 0.28
PDE6BP35913 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PDE6BP35913 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6BP35913 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6BP35913 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PDE6BP35913 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
PDE6BP35913 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6BP35913 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6BP35913 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PDE6BP35913 NOS2P3-201ENST00000411468 867 ntBASIC16.77■□□□□ 0.28
PDE6BP35913 NOS2P2-201ENST00000426269 867 ntBASIC16.77■□□□□ 0.28
PDE6BP35913 AC093106.1-201ENST00000437271 352 ntBASIC16.77■□□□□ 0.28
PDE6BP35913 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6BP35913 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC16.77■□□□□ 0.28
PDE6BP35913 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC16.77■□□□□ 0.28
PDE6BP35913 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC16.77■□□□□ 0.28
PDE6BP35913 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC16.77■□□□□ 0.28
PDE6BP35913 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC16.77■□□□□ 0.28
PDE6BP35913 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC16.77■□□□□ 0.28
PDE6BP35913 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PDE6BP35913 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC16.77■□□□□ 0.28
PDE6BP35913 AC091691.1-201ENST00000583587 1018 ntBASIC16.77■□□□□ 0.28
PDE6BP35913 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PDE6BP35913 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC16.77■□□□□ 0.28
PDE6BP35913 OR3A1-202ENST00000615105 966 ntBASIC16.77■□□□□ 0.28
PDE6BP35913 PSME2-217ENST00000615264 874 ntTSL 5 BASIC16.77■□□□□ 0.28
PDE6BP35913 NF1P11-201ENST00000621292 1282 ntBASIC16.77■□□□□ 0.28
PDE6BP35913 CR392039.2-201ENST00000623182 509 ntBASIC16.77■□□□□ 0.28
PDE6BP35913 PSME2-218ENST00000630027 185 ntTSL 3 BASIC16.77■□□□□ 0.28
PDE6BP35913 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6BP35913 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6BP35913 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PDE6BP35913 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6BP35913 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.77■□□□□ 0.27
PDE6BP35913 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6BP35913 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6BP35913 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PDE6BP35913 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6BP35913 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
PDE6BP35913 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6BP35913 FAM45BP-202ENST00000592932 1624 ntBASIC16.77■□□□□ 0.27
PDE6BP35913 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6BP35913 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6BP35913 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.77■□□□□ 0.27
PDE6BP35913 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PDE6BP35913 MIR600HG-201ENST00000449175 5984 ntBASIC16.77■□□□□ 0.27
PDE6BP35913 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6BP35913 AC034205.3-201ENST00000603595 1376 ntBASIC16.77■□□□□ 0.27
PDE6BP35913 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.76■□□□□ 0.27
PDE6BP35913 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.76■□□□□ 0.27
PDE6BP35913 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PDE6BP35913 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.76■□□□□ 0.27
PDE6BP35913 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PDE6BP35913 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDE6BP35913 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PDE6BP35913 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PDE6BP35913 AC010997.1-201ENST00000447646 350 ntBASIC16.76■□□□□ 0.27
PDE6BP35913 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC16.76■□□□□ 0.27
PDE6BP35913 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC16.76■□□□□ 0.27
PDE6BP35913 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC16.76■□□□□ 0.27
PDE6BP35913 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms