Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TM4SF4P48230 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC15.26■□□□□ 0.03
TM4SF4P48230 DNM1P48-201ENST00000419538 439 ntBASIC15.26■□□□□ 0.03
TM4SF4P48230 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC15.26■□□□□ 0.03
TM4SF4P48230 GAPDHP65-201ENST00000425487 1006 ntBASIC15.26■□□□□ 0.03
TM4SF4P48230 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC15.26■□□□□ 0.03
TM4SF4P48230 CDCA4P3-201ENST00000442572 689 ntBASIC15.26■□□□□ 0.03
TM4SF4P48230 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC15.26■□□□□ 0.03
TM4SF4P48230 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC15.26■□□□□ 0.03
TM4SF4P48230 KRT18P63-201ENST00000505463 979 ntBASIC15.26■□□□□ 0.03
TM4SF4P48230 BCRP5-201ENST00000514371 253 ntBASIC15.26■□□□□ 0.03
TM4SF4P48230 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC15.26■□□□□ 0.03
TM4SF4P48230 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC15.26■□□□□ 0.03
TM4SF4P48230 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC15.26■□□□□ 0.03
TM4SF4P48230 KRT127P-201ENST00000547183 433 ntBASIC15.26■□□□□ 0.03
TM4SF4P48230 AL121992.3-201ENST00000606186 346 ntBASIC15.26■□□□□ 0.03
TM4SF4P48230 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TM4SF4P48230 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC15.26■□□□□ 0.03
TM4SF4P48230 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC15.26■□□□□ 0.03
TM4SF4P48230 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.26■□□□□ 0.03
TM4SF4P48230 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TM4SF4P48230 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TM4SF4P48230 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM4SF4P48230 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.26■□□□□ 0.03
TM4SF4P48230 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TM4SF4P48230 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TM4SF4P48230 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TM4SF4P48230 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC15.25■□□□□ 0.03
TM4SF4P48230 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC15.25■□□□□ 0.03
TM4SF4P48230 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TM4SF4P48230 FTH1P19-201ENST00000402402 528 ntBASIC15.25■□□□□ 0.03
TM4SF4P48230 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC15.25■□□□□ 0.03
TM4SF4P48230 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC15.25■□□□□ 0.03
TM4SF4P48230 AADAC-202ENST00000488869 719 ntTSL 2 BASIC15.25■□□□□ 0.03
TM4SF4P48230 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC15.25■□□□□ 0.03
TM4SF4P48230 DERL1-204ENST00000519018 575 ntTSL 4 BASIC15.25■□□□□ 0.03
TM4SF4P48230 AC136475.6-201ENST00000533113 289 ntBASIC15.25■□□□□ 0.03
TM4SF4P48230 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC15.25■□□□□ 0.03
TM4SF4P48230 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TM4SF4P48230 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC15.25■□□□□ 0.03
TM4SF4P48230 DNM1P50-201ENST00000565767 508 ntBASIC15.25■□□□□ 0.03
TM4SF4P48230 AC012146.4-201ENST00000575546 271 ntBASIC15.25■□□□□ 0.03
TM4SF4P48230 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC15.25■□□□□ 0.03
TM4SF4P48230 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TM4SF4P48230 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.25■□□□□ 0.03
TM4SF4P48230 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.25■□□□□ 0.03
TM4SF4P48230 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC15.25■□□□□ 0.03
TM4SF4P48230 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.25■□□□□ 0.03
TM4SF4P48230 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC15.25■□□□□ 0.03
TM4SF4P48230 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM4SF4P48230 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TM4SF4P48230 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC15.25■□□□□ 0.03
TM4SF4P48230 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.25■□□□□ 0.03
TM4SF4P48230 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.24■□□□□ 0.03
TM4SF4P48230 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TM4SF4P48230 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TM4SF4P48230 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TM4SF4P48230 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TM4SF4P48230 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 COQ4-202ENST00000372875 928 ntTSL 2 BASIC15.24■□□□□ 0.03
TM4SF4P48230 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM4SF4P48230 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC15.24■□□□□ 0.03
TM4SF4P48230 AL021407.3-201ENST00000407522 486 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms