Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDM5CP41229 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDM5CP41229 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC19.95■□□□□ 0.78
KDM5CP41229 SNX18-202ENST00000343017 3140 ntBASIC19.95■□□□□ 0.78
KDM5CP41229 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
KDM5CP41229 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDM5CP41229 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDM5CP41229 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC19.95■□□□□ 0.78
KDM5CP41229 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC19.95■□□□□ 0.78
KDM5CP41229 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KDM5CP41229 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC19.95■□□□□ 0.78
KDM5CP41229 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC19.95■□□□□ 0.78
KDM5CP41229 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
KDM5CP41229 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC19.95■□□□□ 0.78
KDM5CP41229 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC19.95■□□□□ 0.78
KDM5CP41229 MIR4763-201ENST00000581461 92 ntBASIC19.95■□□□□ 0.78
KDM5CP41229 FAM223B-202ENST00000598177 713 ntBASIC19.95■□□□□ 0.78
KDM5CP41229 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC19.95■□□□□ 0.78
KDM5CP41229 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDM5CP41229 FAM223A-202ENST00000625204 713 ntBASIC19.95■□□□□ 0.78
KDM5CP41229 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KDM5CP41229 AC091807.1-201ENST00000418838 1544 ntBASIC19.95■□□□□ 0.78
KDM5CP41229 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KDM5CP41229 BANP-203ENST00000393207 2438 ntTSL 2 BASIC19.94■□□□□ 0.78
KDM5CP41229 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC19.94■□□□□ 0.78
KDM5CP41229 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.94■□□□□ 0.78
KDM5CP41229 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC19.94■□□□□ 0.78
KDM5CP41229 FAM183BP-201ENST00000409072 1595 ntBASIC19.94■□□□□ 0.78
KDM5CP41229 AC090340.1-201ENST00000620778 4980 ntBASIC19.94■□□□□ 0.78
KDM5CP41229 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC19.94■□□□□ 0.78
KDM5CP41229 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC19.94■□□□□ 0.78
KDM5CP41229 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
KDM5CP41229 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
KDM5CP41229 RPS6-201ENST00000315377 863 ntTSL 3 BASIC19.94■□□□□ 0.78
KDM5CP41229 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC19.94■□□□□ 0.78
KDM5CP41229 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
KDM5CP41229 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC19.94■□□□□ 0.78
KDM5CP41229 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 RN7SL363P-201ENST00000482412 273 ntBASIC19.94■□□□□ 0.78
KDM5CP41229 NUP210P2-201ENST00000510577 282 ntBASIC19.94■□□□□ 0.78
KDM5CP41229 ST3GAL1P1-201ENST00000513810 1014 ntBASIC19.94■□□□□ 0.78
KDM5CP41229 AC090825.2-201ENST00000557959 739 ntBASIC19.94■□□□□ 0.78
KDM5CP41229 AC012146.4-201ENST00000575546 271 ntBASIC19.94■□□□□ 0.78
KDM5CP41229 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
KDM5CP41229 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC19.94■□□□□ 0.78
KDM5CP41229 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KDM5CP41229 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC19.94■□□□□ 0.78
KDM5CP41229 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
KDM5CP41229 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC19.94■□□□□ 0.78
KDM5CP41229 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC19.93■□□□□ 0.78
KDM5CP41229 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
KDM5CP41229 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC19.93■□□□□ 0.78
KDM5CP41229 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC19.93■□□□□ 0.78
KDM5CP41229 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.93■□□□□ 0.78
KDM5CP41229 GRK6P1-201ENST00000400595 1711 ntBASIC19.93■□□□□ 0.78
KDM5CP41229 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
KDM5CP41229 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 PHBP3-201ENST00000412562 819 ntBASIC19.93■□□□□ 0.78
KDM5CP41229 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC19.93■□□□□ 0.78
KDM5CP41229 FPGT-205ENST00000482102 561 ntTSL 4 BASIC19.93■□□□□ 0.78
KDM5CP41229 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC19.93■□□□□ 0.78
KDM5CP41229 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC19.93■□□□□ 0.78
KDM5CP41229 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC19.93■□□□□ 0.78
KDM5CP41229 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
KDM5CP41229 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC19.93■□□□□ 0.78
KDM5CP41229 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
KDM5CP41229 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC19.93■□□□□ 0.78
KDM5CP41229 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 AHCYP7-201ENST00000560847 1308 ntBASIC19.93■□□□□ 0.78
KDM5CP41229 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
KDM5CP41229 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
KDM5CP41229 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KDM5CP41229 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms