Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 HRC-203ENST00000595625 2044 ntTSL 5 BASIC23.18■■□□□ 1.3
TOP2AP11388 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TOP2AP11388 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TOP2AP11388 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC23.18■■□□□ 1.3
TOP2AP11388 AC007312.1-201ENST00000427493 258 ntBASIC23.18■■□□□ 1.3
TOP2AP11388 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC23.18■■□□□ 1.3
TOP2AP11388 AC080023.2-201ENST00000532615 208 ntBASIC23.18■■□□□ 1.3
TOP2AP11388 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
TOP2AP11388 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC23.18■■□□□ 1.3
TOP2AP11388 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC23.18■■□□□ 1.3
TOP2AP11388 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC23.18■■□□□ 1.3
TOP2AP11388 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC23.17■■□□□ 1.3
TOP2AP11388 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TOP2AP11388 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 SLC6A6P1-201ENST00000413933 1850 ntBASIC23.17■■□□□ 1.3
TOP2AP11388 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC23.17■■□□□ 1.3
TOP2AP11388 RBM22P2-201ENST00000393978 1814 ntBASIC23.17■■□□□ 1.3
TOP2AP11388 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 AP000897.1-201ENST00000584036 1613 ntBASIC23.17■■□□□ 1.3
TOP2AP11388 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 AL022323.5-201ENST00000624101 2059 ntBASIC23.17■■□□□ 1.3
TOP2AP11388 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 POM121L14P-201ENST00000406100 1558 ntBASIC23.17■■□□□ 1.3
TOP2AP11388 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 HNRNPA1P9-201ENST00000450624 950 ntBASIC23.17■■□□□ 1.3
TOP2AP11388 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC23.17■■□□□ 1.3
TOP2AP11388 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC23.17■■□□□ 1.3
TOP2AP11388 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC23.17■■□□□ 1.3
TOP2AP11388 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC23.17■■□□□ 1.3
TOP2AP11388 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC23.17■■□□□ 1.3
TOP2AP11388 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC23.17■■□□□ 1.3
TOP2AP11388 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
TOP2AP11388 AC116036.2-201ENST00000607592 462 ntBASIC23.17■■□□□ 1.3
TOP2AP11388 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC23.17■■□□□ 1.3
TOP2AP11388 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TOP2AP11388 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TOP2AP11388 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC23.17■■□□□ 1.3
TOP2AP11388 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TOP2AP11388 AL137077.2-201ENST00000635124 1608 ntBASIC23.16■■□□□ 1.3
TOP2AP11388 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TOP2AP11388 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TOP2AP11388 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC23.16■■□□□ 1.3
TOP2AP11388 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC23.16■■□□□ 1.3
TOP2AP11388 MIR766-201ENST00000390223 111 ntBASIC23.16■■□□□ 1.3
TOP2AP11388 PPP1R2P10-201ENST00000393023 595 ntBASIC23.16■■□□□ 1.3
TOP2AP11388 OR7E37P-201ENST00000421076 897 ntBASIC23.16■■□□□ 1.3
TOP2AP11388 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC23.16■■□□□ 1.3
TOP2AP11388 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC23.16■■□□□ 1.3
TOP2AP11388 ST3GAL1P1-201ENST00000513810 1014 ntBASIC23.16■■□□□ 1.3
TOP2AP11388 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TOP2AP11388 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
TOP2AP11388 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TOP2AP11388 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
TOP2AP11388 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TOP2AP11388 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TOP2AP11388 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC23.16■■□□□ 1.3
TOP2AP11388 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TOP2AP11388 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TOP2AP11388 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TOP2AP11388 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TOP2AP11388 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TOP2AP11388 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TOP2AP11388 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC23.15■■□□□ 1.3
TOP2AP11388 AL391903.1-201ENST00000407513 365 ntBASIC23.15■■□□□ 1.3
TOP2AP11388 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC23.15■■□□□ 1.3
TOP2AP11388 AL137077.1-201ENST00000442115 528 ntBASIC23.15■■□□□ 1.3
TOP2AP11388 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TOP2AP11388 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC23.15■■□□□ 1.3
TOP2AP11388 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC23.15■■□□□ 1.3
TOP2AP11388 MIR5193-201ENST00000584510 109 ntBASIC23.15■■□□□ 1.3
TOP2AP11388 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC23.15■■□□□ 1.3
TOP2AP11388 AC073592.10-201ENST00000624789 597 ntBASIC23.15■■□□□ 1.3
TOP2AP11388 BIN3-212ENST00000640731 450 ntTSL 5 BASIC23.15■■□□□ 1.3
TOP2AP11388 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC23.15■■□□□ 1.3
TOP2AP11388 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TOP2AP11388 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TOP2AP11388 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC23.15■■□□□ 1.3
TOP2AP11388 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TOP2AP11388 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TOP2AP11388 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC23.15■■□□□ 1.3
TOP2AP11388 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TOP2AP11388 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms