Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 HP-203ENST00000357763 1482 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 AC008038.1-201ENST00000634247 1314 ntBASIC8.19□□□□□ -1.1
APOBP04114 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 CLUHP8-201ENST00000547527 1485 ntBASIC8.19□□□□□ -1.1
APOBP04114 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
APOBP04114 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 PFN1P3-201ENST00000443612 402 ntBASIC8.19□□□□□ -1.1
APOBP04114 PFN1P4-201ENST00000450970 402 ntBASIC8.19□□□□□ -1.1
APOBP04114 AL356479.1-202ENST00000456933 714 ntTSL 3 BASIC8.19□□□□□ -1.1
APOBP04114 AC096919.1-201ENST00000472730 652 ntBASIC8.19□□□□□ -1.1
APOBP04114 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 AC087441.1-201ENST00000531069 301 ntBASIC8.19□□□□□ -1.1
APOBP04114 AP003717.2-201ENST00000534962 898 ntBASIC8.19□□□□□ -1.1
APOBP04114 AL139022.1-202ENST00000553633 796 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC8.19□□□□□ -1.1
APOBP04114 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 PPATP1-201ENST00000496669 1547 ntBASIC8.19□□□□□ -1.1
APOBP04114 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 MEF2C-207ENST00000503554 1345 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 CST13P-202ENST00000400563 1157 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 TGIF2P1-201ENST00000435390 685 ntBASIC8.19□□□□□ -1.1
APOBP04114 TEPP-202ENST00000441824 998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
APOBP04114 COQ5-202ENST00000445328 992 ntTSL 2 BASIC8.19□□□□□ -1.1
APOBP04114 PTS-204ENST00000525803 625 ntTSL 3 BASIC8.19□□□□□ -1.1
APOBP04114 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC8.19□□□□□ -1.1
APOBP04114 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC8.19□□□□□ -1.1
APOBP04114 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC8.18□□□□□ -1.1
APOBP04114 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
APOBP04114 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC8.18□□□□□ -1.1
APOBP04114 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
APOBP04114 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC8.18□□□□□ -1.1
APOBP04114 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC8.18□□□□□ -1.1
APOBP04114 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC8.18□□□□□ -1.1
APOBP04114 HLA-DRB9-201ENST00000449413 343 ntBASIC8.18□□□□□ -1.1
APOBP04114 PSME2-213ENST00000560410 755 ntTSL 3 BASIC8.18□□□□□ -1.1
APOBP04114 AL133297.2-201ENST00000563162 485 ntTSL 2 BASIC8.18□□□□□ -1.1
APOBP04114 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC8.18□□□□□ -1.1
APOBP04114 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC8.18□□□□□ -1.1
APOBP04114 HRC-203ENST00000595625 2044 ntTSL 5 BASIC8.18□□□□□ -1.1
APOBP04114 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC8.18□□□□□ -1.1
APOBP04114 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
APOBP04114 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
APOBP04114 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
APOBP04114 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 AC091807.1-201ENST00000418838 1544 ntBASIC8.18□□□□□ -1.1
APOBP04114 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
APOBP04114 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC8.18□□□□□ -1.1
APOBP04114 AC244154.1-201ENST00000620148 1555 ntBASIC8.18□□□□□ -1.1
APOBP04114 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC8.18□□□□□ -1.1
APOBP04114 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC8.18□□□□□ -1.1
APOBP04114 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC8.18□□□□□ -1.1
APOBP04114 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
APOBP04114 C1orf158-201ENST00000376210 695 ntTSL 3 BASIC8.18□□□□□ -1.1
APOBP04114 SGCZ-202ENST00000421524 867 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms