Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 OR10B1P-201ENST00000601666 907 ntBASIC12.04□□□□□ -0.48
BEST4Q8NFU0 WFDC1-204ENST00000613603 549 ntBASIC12.04□□□□□ -0.48
BEST4Q8NFU0 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.04□□□□□ -0.48
BEST4Q8NFU0 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 AC087164.2-201ENST00000624514 3130 ntBASIC12.04□□□□□ -0.48
BEST4Q8NFU0 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 SALL4P6-201ENST00000429385 1691 ntBASIC12.03□□□□□ -0.48
BEST4Q8NFU0 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 AC112176.1-201ENST00000565428 3024 ntBASIC12.03□□□□□ -0.48
BEST4Q8NFU0 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 LAP3P2-201ENST00000454686 1454 ntBASIC12.03□□□□□ -0.48
BEST4Q8NFU0 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 CD8B2-202ENST00000417670 633 ntBASIC12.03□□□□□ -0.48
BEST4Q8NFU0 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 PTP4A1P2-201ENST00000546033 454 ntBASIC12.03□□□□□ -0.48
BEST4Q8NFU0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 MIR4683-201ENST00000579659 81 ntBASIC12.03□□□□□ -0.48
BEST4Q8NFU0 CTBP2P3-201ENST00000585629 1255 ntBASIC12.03□□□□□ -0.48
BEST4Q8NFU0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 AC021016.3-201ENST00000608367 477 ntBASIC12.03□□□□□ -0.48
BEST4Q8NFU0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 AC106028.4-201ENST00000614509 607 ntBASIC12.03□□□□□ -0.48
BEST4Q8NFU0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BEST4Q8NFU0 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms