Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC215524.1-201ENST00000635696 241 ntBASIC21.15■□□□□ 0.98
VPS8Q8N3P4 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 KRT18P40-201ENST00000599859 1571 ntBASIC21.15■□□□□ 0.98
VPS8Q8N3P4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 IFNWP2-201ENST00000431203 580 ntBASIC21.14■□□□□ 0.98
VPS8Q8N3P4 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 SLC25A51P3-201ENST00000521814 889 ntBASIC21.14■□□□□ 0.98
VPS8Q8N3P4 FAM86B3P-203ENST00000523992 854 ntBASIC21.14■□□□□ 0.98
VPS8Q8N3P4 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC21.14■□□□□ 0.98
VPS8Q8N3P4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS8Q8N3P4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 PGAM1P11-201ENST00000416729 680 ntBASIC21.13■□□□□ 0.97
VPS8Q8N3P4 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 AL139008.1-201ENST00000437894 228 ntBASIC21.13■□□□□ 0.97
VPS8Q8N3P4 AC133141.1-201ENST00000443015 339 ntBASIC21.13■□□□□ 0.97
VPS8Q8N3P4 AC244197.1-201ENST00000456494 951 ntBASIC21.13■□□□□ 0.97
VPS8Q8N3P4 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 AC091304.3-201ENST00000566500 716 ntBASIC21.13■□□□□ 0.97
VPS8Q8N3P4 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 AC211476.2-201ENST00000608799 708 ntBASIC21.13■□□□□ 0.97
VPS8Q8N3P4 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC21.13■□□□□ 0.97
VPS8Q8N3P4 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
VPS8Q8N3P4 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 RPSAP6-201ENST00000417882 882 ntBASIC21.12■□□□□ 0.97
VPS8Q8N3P4 AL136084.1-201ENST00000449172 318 ntBASIC21.12■□□□□ 0.97
VPS8Q8N3P4 AC015818.1-201ENST00000451011 244 ntBASIC21.12■□□□□ 0.97
VPS8Q8N3P4 AC092896.1-201ENST00000465850 380 ntBASIC21.12■□□□□ 0.97
VPS8Q8N3P4 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 AC078814.4-201ENST00000546650 327 ntBASIC21.12■□□□□ 0.97
VPS8Q8N3P4 METTL23-211ENST00000589977 617 ntTSL 3 BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.12■□□□□ 0.97
VPS8Q8N3P4 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms