Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AP001102.1-201ENST00000528959 409 ntBASIC12.63□□□□□ -0.39
CACNA1BQ00975 AC091153.4-201ENST00000570493 480 ntTSL 5 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC12.63□□□□□ -0.39
CACNA1BQ00975 AP006621.5-202ENST00000623692 636 ntBASIC12.63□□□□□ -0.39
CACNA1BQ00975 AC112702.1-201ENST00000623712 366 ntBASIC12.63□□□□□ -0.39
CACNA1BQ00975 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 CA6-205ENST00000480186 1493 ntTSL 2 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 HMGN1P4-201ENST00000419500 290 ntBASIC12.63□□□□□ -0.39
CACNA1BQ00975 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 RAB42P1-201ENST00000555078 316 ntBASIC12.63□□□□□ -0.39
CACNA1BQ00975 AC131274.3-201ENST00000578745 1271 ntBASIC12.63□□□□□ -0.39
CACNA1BQ00975 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 MYO15B-237ENST00000642007 4893 ntBASIC12.63□□□□□ -0.39
CACNA1BQ00975 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1BQ00975 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.63□□□□□ -0.39
CACNA1BQ00975 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 ZNF343-202ENST00000358413 771 ntTSL 5 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 KRT41P-201ENST00000393988 1293 ntBASIC12.62□□□□□ -0.39
CACNA1BQ00975 CACYBPP3-201ENST00000406011 625 ntBASIC12.62□□□□□ -0.39
CACNA1BQ00975 CIDECP-203ENST00000424691 1088 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 ASLP1-201ENST00000428790 637 ntBASIC12.62□□□□□ -0.39
CACNA1BQ00975 AC116347.1-201ENST00000442824 720 ntBASIC12.62□□□□□ -0.39
CACNA1BQ00975 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 MYADML-202ENST00000490394 797 ntTSL 3 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 DYNLL1P2-201ENST00000554807 270 ntBASIC12.62□□□□□ -0.39
CACNA1BQ00975 AC103740.2-201ENST00000557900 1225 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 AC005726.6-201ENST00000579019 1083 ntTSL 3 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 AC015688.4-201ENST00000580780 1647 ntBASIC12.62□□□□□ -0.39
CACNA1BQ00975 STK16-202ENST00000409260 1493 ntTSL 5 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 PMF1-201ENST00000368273 884 ntTSL 2 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 TSACC-206ENST00000466306 477 ntTSL 3 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 AC073578.1-201ENST00000535133 493 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1BQ00975 CD63-212ENST00000552067 621 ntTSL 5 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.62□□□□□ -0.39
CACNA1BQ00975 AP005264.6-201ENST00000592801 414 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms