Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA6P23229 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA6P23229 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.9■□□□□ 0.3
ITGA6P23229 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA6P23229 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.9■□□□□ 0.3
ITGA6P23229 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA6P23229 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA6P23229 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA6P23229 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ITGA6P23229 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ITGA6P23229 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
ITGA6P23229 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ITGA6P23229 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.89■□□□□ 0.3
ITGA6P23229 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.89■□□□□ 0.3
ITGA6P23229 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
ITGA6P23229 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ITGA6P23229 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC16.89■□□□□ 0.29
ITGA6P23229 AL929302.1-201ENST00000426556 871 ntBASIC16.89■□□□□ 0.29
ITGA6P23229 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA6P23229 NRADDP-201ENST00000437305 691 ntBASIC16.89■□□□□ 0.29
ITGA6P23229 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA6P23229 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC16.89■□□□□ 0.29
ITGA6P23229 AL451000.1-201ENST00000451300 1186 ntBASIC16.89■□□□□ 0.29
ITGA6P23229 AC083801.1-201ENST00000491689 358 ntBASIC16.89■□□□□ 0.29
ITGA6P23229 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.89■□□□□ 0.29
ITGA6P23229 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.89■□□□□ 0.29
ITGA6P23229 PIGCP1-201ENST00000527583 895 ntBASIC16.89■□□□□ 0.29
ITGA6P23229 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC16.89■□□□□ 0.29
ITGA6P23229 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.89■□□□□ 0.29
ITGA6P23229 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 AC023794.5-201ENST00000564380 2157 ntBASIC16.89■□□□□ 0.29
ITGA6P23229 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.89■□□□□ 0.29
ITGA6P23229 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA6P23229 AC097376.2-205ENST00000610159 5334 ntBASIC16.89■□□□□ 0.29
ITGA6P23229 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA6P23229 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA6P23229 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ITGA6P23229 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC16.88■□□□□ 0.29
ITGA6P23229 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.88■□□□□ 0.29
ITGA6P23229 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.88■□□□□ 0.29
ITGA6P23229 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ITGA6P23229 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ITGA6P23229 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 SIRPB3P-201ENST00000340424 1216 ntBASIC16.88■□□□□ 0.29
ITGA6P23229 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.88■□□□□ 0.29
ITGA6P23229 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ITGA6P23229 HLA-DMA-202ENST00000395303 1007 ntBASIC16.88■□□□□ 0.29
ITGA6P23229 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC16.88■□□□□ 0.29
ITGA6P23229 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC16.88■□□□□ 0.29
ITGA6P23229 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.88■□□□□ 0.29
ITGA6P23229 ZNF877P-201ENST00000437614 612 ntBASIC16.88■□□□□ 0.29
ITGA6P23229 GOLGA6L16P-201ENST00000441780 1299 ntBASIC16.88■□□□□ 0.29
ITGA6P23229 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.88■□□□□ 0.29
ITGA6P23229 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.88■□□□□ 0.29
ITGA6P23229 AL139339.2-201ENST00000608063 657 ntBASIC16.88■□□□□ 0.29
ITGA6P23229 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ITGA6P23229 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.88■□□□□ 0.29
ITGA6P23229 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA6P23229 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ITGA6P23229 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA6P23229 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.87■□□□□ 0.29
ITGA6P23229 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA6P23229 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ITGA6P23229 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA6P23229 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA6P23229 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA6P23229 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA6P23229 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA6P23229 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.87■□□□□ 0.29
ITGA6P23229 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.87■□□□□ 0.29
ITGA6P23229 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms