Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BCL3P20749 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
BCL3P20749 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BCL3P20749 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
BCL3P20749 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BCL3P20749 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BCL3P20749 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BCL3P20749 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BCL3P20749 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
BCL3P20749 AC015909.3-201ENST00000572855 1794 ntBASIC11.84□□□□□ -0.51
BCL3P20749 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.84□□□□□ -0.51
BCL3P20749 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC11.84□□□□□ -0.51
BCL3P20749 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC11.84□□□□□ -0.51
BCL3P20749 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.84□□□□□ -0.51
BCL3P20749 KRT8P43-201ENST00000406052 1458 ntBASIC11.84□□□□□ -0.51
BCL3P20749 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC11.84□□□□□ -0.51
BCL3P20749 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 KRT17P5-201ENST00000332088 839 ntBASIC11.84□□□□□ -0.51
BCL3P20749 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
BCL3P20749 CRCP-204ENST00000398684 492 ntTSL 2 BASIC11.84□□□□□ -0.51
BCL3P20749 MIR1908-201ENST00000410394 80 ntBASIC11.84□□□□□ -0.51
BCL3P20749 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC11.84□□□□□ -0.51
BCL3P20749 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 RPS2P32-201ENST00000439199 892 ntBASIC11.84□□□□□ -0.51
BCL3P20749 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC11.84□□□□□ -0.51
BCL3P20749 PFN1P12-201ENST00000455938 534 ntBASIC11.84□□□□□ -0.51
BCL3P20749 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC11.84□□□□□ -0.51
BCL3P20749 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC11.84□□□□□ -0.51
BCL3P20749 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC11.84□□□□□ -0.51
BCL3P20749 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 AL805961.1-203ENST00000641078 1258 ntBASIC11.84□□□□□ -0.51
BCL3P20749 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC11.84□□□□□ -0.51
BCL3P20749 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
BCL3P20749 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
BCL3P20749 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC11.84□□□□□ -0.51
BCL3P20749 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.84□□□□□ -0.51
BCL3P20749 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.84□□□□□ -0.51
BCL3P20749 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.84□□□□□ -0.51
BCL3P20749 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BCL3P20749 FRMPD2B-201ENST00000431305 1347 ntBASIC11.84□□□□□ -0.51
BCL3P20749 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.84□□□□□ -0.51
BCL3P20749 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.83□□□□□ -0.51
BCL3P20749 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC11.83□□□□□ -0.51
BCL3P20749 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.51
BCL3P20749 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
BCL3P20749 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.83□□□□□ -0.52
BCL3P20749 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BCL3P20749 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BCL3P20749 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC11.83□□□□□ -0.52
BCL3P20749 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BCL3P20749 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC11.83□□□□□ -0.52
BCL3P20749 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.83□□□□□ -0.52
BCL3P20749 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.83□□□□□ -0.52
BCL3P20749 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BCL3P20749 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BCL3P20749 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BCL3P20749 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BCL3P20749 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
BCL3P20749 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
BCL3P20749 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.83□□□□□ -0.52
BCL3P20749 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BCL3P20749 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
BCL3P20749 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
BCL3P20749 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms