Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 TCAF1P1-201ENST00000414990 2232 ntBASIC12.47□□□□□ -0.41
HLA-DOBP13765 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 AC099521.3-201ENST00000624251 2938 ntBASIC12.47□□□□□ -0.41
HLA-DOBP13765 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DOBP13765 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.47□□□□□ -0.41
HLA-DOBP13765 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 RN7SL258P-201ENST00000478664 300 ntBASIC12.46□□□□□ -0.41
HLA-DOBP13765 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 NUP210P1-202ENST00000504322 710 ntBASIC12.46□□□□□ -0.41
HLA-DOBP13765 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 RTN3P1-201ENST00000536295 711 ntBASIC12.46□□□□□ -0.41
HLA-DOBP13765 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 RN7SL574P-201ENST00000581512 297 ntBASIC12.46□□□□□ -0.41
HLA-DOBP13765 MIR4754-201ENST00000582477 89 ntBASIC12.46□□□□□ -0.41
HLA-DOBP13765 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
HLA-DOBP13765 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HLA-DOBP13765 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
HLA-DOBP13765 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
HLA-DOBP13765 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
HLA-DOBP13765 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.46□□□□□ -0.42
HLA-DOBP13765 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HLA-DOBP13765 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.46□□□□□ -0.42
HLA-DOBP13765 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms