Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFTRP13569 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CFTRP13569 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC22.66■■□□□ 1.22
CFTRP13569 AL078621.2-201ENST00000419351 698 ntBASIC22.66■■□□□ 1.22
CFTRP13569 EEF1GP3-201ENST00000421044 1288 ntBASIC22.66■■□□□ 1.22
CFTRP13569 APRT-202ENST00000426324 664 ntTSL 2 BASIC22.66■■□□□ 1.22
CFTRP13569 ALMS1P1-201ENST00000428767 921 ntBASIC22.66■■□□□ 1.22
CFTRP13569 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC22.66■■□□□ 1.22
CFTRP13569 AKIRIN1P2-201ENST00000440655 570 ntBASIC22.66■■□□□ 1.22
CFTRP13569 OR2A15P-201ENST00000463814 900 ntBASIC22.66■■□□□ 1.22
CFTRP13569 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFTRP13569 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC22.66■■□□□ 1.22
CFTRP13569 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CFTRP13569 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC22.66■■□□□ 1.22
CFTRP13569 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFTRP13569 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC22.66■■□□□ 1.22
CFTRP13569 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
CFTRP13569 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFTRP13569 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC22.66■■□□□ 1.22
CFTRP13569 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
CFTRP13569 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFTRP13569 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC22.66■■□□□ 1.22
CFTRP13569 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFTRP13569 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFTRP13569 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CFTRP13569 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFTRP13569 HRC-203ENST00000595625 2044 ntTSL 5 BASIC22.66■■□□□ 1.22
CFTRP13569 JAML-211ENST00000533261 1508 ntTSL 5 BASIC22.66■■□□□ 1.22
CFTRP13569 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CFTRP13569 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFTRP13569 SRSF9P1-201ENST00000399149 530 ntBASIC22.66■■□□□ 1.22
CFTRP13569 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC22.66■■□□□ 1.22
CFTRP13569 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC22.66■■□□□ 1.22
CFTRP13569 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC22.66■■□□□ 1.22
CFTRP13569 MT1G-204ENST00000569500 305 ntTSL 3 BASIC22.66■■□□□ 1.22
CFTRP13569 AC026304.1-201ENST00000597953 561 ntBASIC22.66■■□□□ 1.22
CFTRP13569 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC22.66■■□□□ 1.22
CFTRP13569 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC22.66■■□□□ 1.22
CFTRP13569 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFTRP13569 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CFTRP13569 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CFTRP13569 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC22.65■■□□□ 1.22
CFTRP13569 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFTRP13569 AP000897.1-201ENST00000584036 1613 ntBASIC22.65■■□□□ 1.22
CFTRP13569 AC073862.3-201ENST00000624597 1648 ntBASIC22.65■■□□□ 1.22
CFTRP13569 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CFTRP13569 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFTRP13569 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFTRP13569 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
CFTRP13569 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFTRP13569 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFTRP13569 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC22.65■■□□□ 1.22
CFTRP13569 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFTRP13569 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC22.65■■□□□ 1.22
CFTRP13569 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFTRP13569 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CFTRP13569 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CFTRP13569 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC22.65■■□□□ 1.22
CFTRP13569 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC22.65■■□□□ 1.22
CFTRP13569 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC22.65■■□□□ 1.22
CFTRP13569 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFTRP13569 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC22.65■■□□□ 1.22
CFTRP13569 JPT2-214ENST00000569765 782 ntTSL 2 BASIC22.65■■□□□ 1.22
CFTRP13569 AC087893.1-201ENST00000612818 664 ntBASIC22.65■■□□□ 1.22
CFTRP13569 AC152010.1-201ENST00000415779 2006 ntBASIC22.65■■□□□ 1.22
CFTRP13569 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
CFTRP13569 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
CFTRP13569 KRT18P40-201ENST00000599859 1571 ntBASIC22.64■■□□□ 1.22
CFTRP13569 BX005132.1-201ENST00000641403 1580 ntBASIC22.64■■□□□ 1.22
CFTRP13569 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CFTRP13569 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CFTRP13569 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CFTRP13569 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC22.64■■□□□ 1.22
CFTRP13569 CR383656.2-201ENST00000548656 2254 ntBASIC22.64■■□□□ 1.22
CFTRP13569 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC22.64■■□□□ 1.22
CFTRP13569 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC22.64■■□□□ 1.21
CFTRP13569 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CFTRP13569 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFTRP13569 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC22.64■■□□□ 1.21
CFTRP13569 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFTRP13569 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFTRP13569 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC22.64■■□□□ 1.21
CFTRP13569 RPS15P5-201ENST00000449885 432 ntBASIC22.64■■□□□ 1.21
CFTRP13569 CMC2-202ENST00000486645 766 ntTSL 3 BASIC22.64■■□□□ 1.21
CFTRP13569 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CFTRP13569 AC005336.1-201ENST00000585431 1243 ntBASIC22.64■■□□□ 1.21
CFTRP13569 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC22.64■■□□□ 1.21
CFTRP13569 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC22.64■■□□□ 1.21
CFTRP13569 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC22.64■■□□□ 1.21
CFTRP13569 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC22.64■■□□□ 1.21
CFTRP13569 AC106774.4-201ENST00000600799 409 ntBASIC22.64■■□□□ 1.21
CFTRP13569 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC22.64■■□□□ 1.21
CFTRP13569 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
CFTRP13569 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CFTRP13569 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFTRP13569 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFTRP13569 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC22.63■■□□□ 1.21
CFTRP13569 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC22.63■■□□□ 1.21
CFTRP13569 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
CFTRP13569 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms