Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AC112702.1-201ENST00000623712 366 ntBASIC13.19□□□□□ -0.3
RIF1Q5UIP0 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 ACP1-207ENST00000439645 605 ntTSL 2 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 RN7SL624P-201ENST00000580297 278 ntBASIC13.18□□□□□ -0.3
RIF1Q5UIP0 AL589743.3-201ENST00000604121 517 ntBASIC13.18□□□□□ -0.3
RIF1Q5UIP0 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 AC244097.1-201ENST00000621631 1216 ntBASIC13.18□□□□□ -0.3
RIF1Q5UIP0 GH2-205ENST00000622506 702 ntTSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 AC117500.5-201ENST00000623233 527 ntBASIC13.18□□□□□ -0.3
RIF1Q5UIP0 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 IFNWP19-201ENST00000438727 566 ntBASIC13.18□□□□□ -0.3
RIF1Q5UIP0 AQP7-207ENST00000447660 998 ntTSL 2 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 ST3GAL1P1-201ENST00000513810 1014 ntBASIC13.18□□□□□ -0.3
RIF1Q5UIP0 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 AC018442.1-201ENST00000421439 2061 ntBASIC13.18□□□□□ -0.3
RIF1Q5UIP0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIF1Q5UIP0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 AL365181.3-201ENST00000605886 3222 ntBASIC13.17□□□□□ -0.3
RIF1Q5UIP0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 PFN1P10-201ENST00000455962 327 ntBASIC13.17□□□□□ -0.3
RIF1Q5UIP0 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 Z69706.1-201ENST00000595428 547 ntBASIC13.17□□□□□ -0.3
RIF1Q5UIP0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 RBAK-201ENST00000353796 4125 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms