Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC11.7□□□□□ -0.54
CD74P04233 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC11.7□□□□□ -0.54
CD74P04233 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.7□□□□□ -0.54
CD74P04233 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.7□□□□□ -0.54
CD74P04233 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.7□□□□□ -0.54
CD74P04233 AC112492.5-201ENST00000421897 457 ntBASIC11.7□□□□□ -0.54
CD74P04233 POM121L10P-201ENST00000436994 1285 ntBASIC11.7□□□□□ -0.54
CD74P04233 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.7□□□□□ -0.54
CD74P04233 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CD74P04233 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.7□□□□□ -0.54
CD74P04233 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CD74P04233 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.7□□□□□ -0.54
CD74P04233 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.7□□□□□ -0.54
CD74P04233 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CD74P04233 TDH-203ENST00000531764 1110 ntBASIC11.7□□□□□ -0.54
CD74P04233 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.7□□□□□ -0.54
CD74P04233 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC11.7□□□□□ -0.54
CD74P04233 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.7□□□□□ -0.54
CD74P04233 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CD74P04233 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC11.7□□□□□ -0.54
CD74P04233 Z98259.2-201ENST00000641583 609 ntBASIC11.7□□□□□ -0.54
CD74P04233 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.7□□□□□ -0.54
CD74P04233 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC11.7□□□□□ -0.54
CD74P04233 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
CD74P04233 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.7□□□□□ -0.54
CD74P04233 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC11.7□□□□□ -0.54
CD74P04233 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
CD74P04233 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CD74P04233 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
CD74P04233 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
CD74P04233 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD74P04233 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
CD74P04233 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CD74P04233 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC11.69□□□□□ -0.54
CD74P04233 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
CD74P04233 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.69□□□□□ -0.54
CD74P04233 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
CD74P04233 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 AHCYP4-201ENST00000419201 1315 ntBASIC11.69□□□□□ -0.54
CD74P04233 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.69□□□□□ -0.54
CD74P04233 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
CD74P04233 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
CD74P04233 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.69□□□□□ -0.54
CD74P04233 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 KRT18P36-201ENST00000411618 1276 ntBASIC11.69□□□□□ -0.54
CD74P04233 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.69□□□□□ -0.54
CD74P04233 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.69□□□□□ -0.54
CD74P04233 TSPY16P-201ENST00000449843 468 ntBASIC11.69□□□□□ -0.54
CD74P04233 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
CD74P04233 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.69□□□□□ -0.54
CD74P04233 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.69□□□□□ -0.54
CD74P04233 AP001889.1-201ENST00000525414 633 ntBASIC11.69□□□□□ -0.54
CD74P04233 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
CD74P04233 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
CD74P04233 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.69□□□□□ -0.54
CD74P04233 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.69□□□□□ -0.54
CD74P04233 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
CD74P04233 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 AP002353.1-201ENST00000528257 1599 ntBASIC11.69□□□□□ -0.54
CD74P04233 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC11.69□□□□□ -0.54
CD74P04233 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC11.69□□□□□ -0.54
CD74P04233 AL354989.2-201ENST00000435838 1540 ntBASIC11.69□□□□□ -0.54
CD74P04233 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD74P04233 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms