Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 AC125807.2-201ENST00000513358 3514 ntBASIC14.17□□□□□ -0.14
CCDC78A2IDD5 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 ACTG1P2-201ENST00000415776 1125 ntBASIC14.17□□□□□ -0.14
CCDC78A2IDD5 ACTG1P11-201ENST00000425411 1125 ntBASIC14.17□□□□□ -0.14
CCDC78A2IDD5 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 DUX4L50-201ENST00000455245 715 ntBASIC14.17□□□□□ -0.14
CCDC78A2IDD5 AC099548.2-209ENST00000480264 625 ntBASIC14.17□□□□□ -0.14
CCDC78A2IDD5 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 GOLGA2P8-201ENST00000505201 779 ntBASIC14.17□□□□□ -0.14
CCDC78A2IDD5 ZNF767P-206ENST00000513792 565 ntBASIC14.17□□□□□ -0.14
CCDC78A2IDD5 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 AL645939.5-201ENST00000606834 243 ntBASIC14.17□□□□□ -0.14
CCDC78A2IDD5 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 CR392039.2-201ENST00000623182 509 ntBASIC14.17□□□□□ -0.14
CCDC78A2IDD5 NAP1L6-202ENST00000641404 1222 ntBASIC14.17□□□□□ -0.14
CCDC78A2IDD5 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 AC020907.1-201ENST00000616460 1350 ntBASIC14.17□□□□□ -0.14
CCDC78A2IDD5 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CCDC78A2IDD5 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 AL645937.6-201ENST00000641122 3727 ntBASIC14.16□□□□□ -0.14
CCDC78A2IDD5 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 AC102953.2-201ENST00000609755 3026 ntBASIC14.16□□□□□ -0.14
CCDC78A2IDD5 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 AC016700.1-201ENST00000429424 312 ntBASIC14.16□□□□□ -0.14
CCDC78A2IDD5 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 KRT18P8-201ENST00000581937 1246 ntBASIC14.16□□□□□ -0.14
CCDC78A2IDD5 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC78A2IDD5 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms