Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 PYY2-201ENST00000315776 282 ntBASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 AC098934.1-203ENST00000442868 1262 ntBASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 LDHBP1-201ENST00000455730 1119 ntBASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 RNA5SP417-201ENST00000516459 108 ntBASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 OR5BD1P-201ENST00000532527 817 ntBASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 AP000911.2-201ENST00000534330 502 ntBASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 Z82170.1-201ENST00000625081 3192 ntBASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CLIP2Q9UDT6 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 PPP1R2P4-201ENST00000424051 595 ntBASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 AC253536.4-201ENST00000440539 267 ntBASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 AL354861.1-201ENST00000445213 355 ntBASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 TMCO5B-205ENST00000530020 894 ntBASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 AC145285.5-201ENST00000562217 361 ntBASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 MIR4649-201ENST00000582839 64 ntBASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 AC005041.3-201ENST00000606287 649 ntBASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 AP000322.3-201ENST00000608665 388 ntBASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 AC138969.2-201ENST00000532739 9932 ntBASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 KRT8P18-201ENST00000413425 1445 ntBASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIP2Q9UDT6 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 RN7SL788P-201ENST00000460504 316 ntBASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 CR383656.3-201ENST00000551315 183 ntBASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 NUDT4P2-201ENST00000578341 546 ntBASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 RN7SL470P-201ENST00000583069 259 ntBASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 AC007250.1-201ENST00000608934 338 ntBASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 AC073911.3-201ENST00000624401 631 ntBASIC16.52■□□□□ 0.24
CLIP2Q9UDT6 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms