Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 AC006529.1-201ENST00000459978 637 ntBASIC15.15■□□□□ 0.02
NCKAP1LP55160 CR383656.3-201ENST00000551315 183 ntBASIC15.15■□□□□ 0.02
NCKAP1LP55160 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 MIR3147-201ENST00000577811 66 ntBASIC15.15■□□□□ 0.02
NCKAP1LP55160 AC132812.1-201ENST00000583145 892 ntBASIC15.15■□□□□ 0.02
NCKAP1LP55160 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC15.15■□□□□ 0.02
NCKAP1LP55160 COX6A1P2-201ENST00000620597 330 ntBASIC15.15■□□□□ 0.02
NCKAP1LP55160 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 KRT18P62-201ENST00000446618 1287 ntBASIC15.14■□□□□ 0.01
NCKAP1LP55160 RPL7P35-201ENST00000446943 740 ntBASIC15.14■□□□□ 0.01
NCKAP1LP55160 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 AC100858.1-201ENST00000514059 1228 ntBASIC15.14■□□□□ 0.01
NCKAP1LP55160 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC15.14■□□□□ 0.01
NCKAP1LP55160 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCKAP1LP55160 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms