Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM23P36406 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM23P36406 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM23P36406 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
TRIM23P36406 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM23P36406 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRIM23P36406 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM23P36406 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM23P36406 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM23P36406 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRIM23P36406 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRIM23P36406 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRIM23P36406 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM23P36406 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRIM23P36406 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
TRIM23P36406 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 AC107918.4-201ENST00000641966 3141 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRIM23P36406 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM23P36406 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM23P36406 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
TRIM23P36406 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM23P36406 RCC2P5-201ENST00000492126 1487 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRIM23P36406 AL627389.1-201ENST00000413508 1182 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM23P36406 AC108734.2-201ENST00000420887 1069 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 BCAS2P2-201ENST00000425064 674 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 PSAT1P2-201ENST00000426107 972 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM23P36406 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM23P36406 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM23P36406 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRIM23P36406 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM23P36406 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRIM23P36406 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.64□□□□□ -0.23
TRIM23P36406 AC013553.1-201ENST00000560906 267 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM23P36406 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.64□□□□□ -0.23
TRIM23P36406 MIR5196-201ENST00000578146 115 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 AL356740.1-201ENST00000602192 1297 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 MIR8071-1-201ENST00000616769 65 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 MIR8071-2-201ENST00000616772 65 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM23P36406 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM23P36406 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM23P36406 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 AL365181.1-201ENST00000564032 1828 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRIM23P36406 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRIM23P36406 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRIM23P36406 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM23P36406 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM23P36406 AC092115.1-201ENST00000566277 1402 ntBASIC13.64□□□□□ -0.23
TRIM23P36406 AC020763.3-201ENST00000625095 2904 ntBASIC13.63□□□□□ -0.23
TRIM23P36406 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM23P36406 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM23P36406 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM23P36406 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRIM23P36406 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM23P36406 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM23P36406 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM23P36406 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM23P36406 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM23P36406 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM23P36406 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRIM23P36406 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM23P36406 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM23P36406 AC245140.2-201ENST00000624054 1939 ntBASIC13.63□□□□□ -0.23
TRIM23P36406 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms