Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
FREM3P0C091 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.62□□□□□ -0.39
FREM3P0C091 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FREM3P0C091 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 AC108734.2-201ENST00000420887 1069 ntBASIC12.62□□□□□ -0.39
FREM3P0C091 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.62□□□□□ -0.39
FREM3P0C091 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.62□□□□□ -0.39
FREM3P0C091 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.62□□□□□ -0.39
FREM3P0C091 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.62□□□□□ -0.39
FREM3P0C091 OR5BD1P-201ENST00000532527 817 ntBASIC12.62□□□□□ -0.39
FREM3P0C091 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.62□□□□□ -0.39
FREM3P0C091 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.62□□□□□ -0.39
FREM3P0C091 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.62□□□□□ -0.39
FREM3P0C091 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.62□□□□□ -0.39
FREM3P0C091 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC12.62□□□□□ -0.39
FREM3P0C091 AP000322.3-201ENST00000608665 388 ntBASIC12.62□□□□□ -0.39
FREM3P0C091 AL132780.4-201ENST00000624870 1135 ntBASIC12.62□□□□□ -0.39
FREM3P0C091 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
FREM3P0C091 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.62□□□□□ -0.39
FREM3P0C091 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.62□□□□□ -0.39
FREM3P0C091 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.62□□□□□ -0.39
FREM3P0C091 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FREM3P0C091 SHMT1P1-201ENST00000419974 1312 ntBASIC12.62□□□□□ -0.39
FREM3P0C091 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.61□□□□□ -0.39
FREM3P0C091 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
FREM3P0C091 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 AC005722.1-201ENST00000431878 964 ntBASIC12.61□□□□□ -0.39
FREM3P0C091 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.61□□□□□ -0.39
FREM3P0C091 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
FREM3P0C091 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.61□□□□□ -0.39
FREM3P0C091 AC138466.5-201ENST00000624002 808 ntBASIC12.61□□□□□ -0.39
FREM3P0C091 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 DGCR9-201ENST00000609630 2415 ntBASIC12.61□□□□□ -0.39
FREM3P0C091 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 TCAF1P1-201ENST00000414990 2232 ntBASIC12.61□□□□□ -0.39
FREM3P0C091 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
FREM3P0C091 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.61□□□□□ -0.39
FREM3P0C091 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.61□□□□□ -0.39
FREM3P0C091 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.61□□□□□ -0.39
FREM3P0C091 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.61□□□□□ -0.39
FREM3P0C091 AC012362.1-201ENST00000434906 739 ntBASIC12.61□□□□□ -0.39
FREM3P0C091 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.61□□□□□ -0.39
FREM3P0C091 LYPLA2P1-203ENST00000447689 696 ntBASIC12.61□□□□□ -0.39
FREM3P0C091 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.61□□□□□ -0.39
FREM3P0C091 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12.61□□□□□ -0.39
FREM3P0C091 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.61□□□□□ -0.39
FREM3P0C091 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FREM3P0C091 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.61□□□□□ -0.39
FREM3P0C091 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC12.61□□□□□ -0.39
FREM3P0C091 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.61□□□□□ -0.39
FREM3P0C091 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms