Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 SIRPB3P-201ENST00000340424 1216 ntBASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AC106827.1-201ENST00000366454 431 ntBASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 IFNWP2-201ENST00000431203 580 ntBASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AC007279.1-201ENST00000448547 837 ntBASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AC104212.2-201ENST00000478813 628 ntBASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AC113385.2-201ENST00000614465 762 ntBASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AC026120.2-201ENST00000617239 309 ntBASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 CR383656.2-201ENST00000548656 2254 ntBASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DNMT3BQ9UBC3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 AC099521.3-201ENST00000624251 2938 ntBASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 RN7SL605P-201ENST00000577229 281 ntBASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 GGNBP1-204ENST00000613113 887 ntBASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 AL627230.2-201ENST00000613254 655 ntBASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 AL157996.1-201ENST00000624684 2299 ntBASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DNMT3BQ9UBC3 AL928921.2-201ENST00000641325 2442 ntBASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
DNMT3BQ9UBC3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms