Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 INTS4P1-203ENST00000641008 3683 ntBASIC12.75□□□□□ -0.37
USB1Q9BQ65 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 ACP1-203ENST00000405233 1149 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 RN7SL720P-201ENST00000488178 304 ntBASIC12.75□□□□□ -0.37
USB1Q9BQ65 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.75□□□□□ -0.37
USB1Q9BQ65 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 AC007614.4-201ENST00000564048 1827 ntBASIC12.75□□□□□ -0.37
USB1Q9BQ65 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 AP003117.1-201ENST00000602771 554 ntBASIC12.75□□□□□ -0.37
USB1Q9BQ65 AL139022.2-201ENST00000606934 443 ntBASIC12.75□□□□□ -0.37
USB1Q9BQ65 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 AC079414.3-201ENST00000612986 1090 ntBASIC12.75□□□□□ -0.37
USB1Q9BQ65 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 AC099521.2-201ENST00000619354 2036 ntBASIC12.75□□□□□ -0.37
USB1Q9BQ65 AL591471.1-201ENST00000621855 229 ntBASIC12.75□□□□□ -0.37
USB1Q9BQ65 AP000770.2-201ENST00000623694 100 ntBASIC12.75□□□□□ -0.37
USB1Q9BQ65 AL591122.2-201ENST00000624125 1853 ntBASIC12.75□□□□□ -0.37
USB1Q9BQ65 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.75□□□□□ -0.37
USB1Q9BQ65 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USB1Q9BQ65 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AC105206.1-202ENST00000314927 2368 ntBASIC12.74□□□□□ -0.37
USB1Q9BQ65 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 KRT8P21-201ENST00000430398 1491 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms