Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.27□□□□□ -0.29
SKP1P63208 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.27□□□□□ -0.29
SKP1P63208 KLF17P1-201ENST00000547105 1126 ntBASIC13.27□□□□□ -0.29
SKP1P63208 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.27□□□□□ -0.29
SKP1P63208 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.27□□□□□ -0.29
SKP1P63208 MIR4265-201ENST00000582152 99 ntBASIC13.27□□□□□ -0.29
SKP1P63208 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 AL359091.4-201ENST00000610052 409 ntBASIC13.27□□□□□ -0.29
SKP1P63208 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.27□□□□□ -0.29
SKP1P63208 AC103691.2-201ENST00000618824 433 ntBASIC13.27□□□□□ -0.29
SKP1P63208 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
SKP1P63208 AC008620.2-201ENST00000510294 1569 ntBASIC13.27□□□□□ -0.29
SKP1P63208 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.27□□□□□ -0.29
SKP1P63208 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SKP1P63208 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.27□□□□□ -0.29
SKP1P63208 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.27□□□□□ -0.29
SKP1P63208 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.27□□□□□ -0.29
SKP1P63208 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.27□□□□□ -0.29
SKP1P63208 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SKP1P63208 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SKP1P63208 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SKP1P63208 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.27□□□□□ -0.29
SKP1P63208 AL928654.5-201ENST00000624831 2501 ntBASIC13.27□□□□□ -0.29
SKP1P63208 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.26□□□□□ -0.29
SKP1P63208 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.26□□□□□ -0.29
SKP1P63208 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.26□□□□□ -0.29
SKP1P63208 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SKP1P63208 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.26□□□□□ -0.29
SKP1P63208 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.26□□□□□ -0.29
SKP1P63208 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.26□□□□□ -0.29
SKP1P63208 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 MIR1307-201ENST00000408840 149 ntBASIC13.26□□□□□ -0.29
SKP1P63208 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.26□□□□□ -0.29
SKP1P63208 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SKP1P63208 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 AC007279.1-201ENST00000448547 837 ntBASIC13.26□□□□□ -0.29
SKP1P63208 FTLP1-201ENST00000449155 526 ntBASIC13.26□□□□□ -0.29
SKP1P63208 AF013593.1-201ENST00000458074 1487 ntBASIC13.26□□□□□ -0.29
SKP1P63208 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SKP1P63208 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.26□□□□□ -0.29
SKP1P63208 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 ORAOV1P1-201ENST00000503108 395 ntBASIC13.26□□□□□ -0.29
SKP1P63208 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.26□□□□□ -0.29
SKP1P63208 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.26□□□□□ -0.29
SKP1P63208 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.26□□□□□ -0.29
SKP1P63208 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SKP1P63208 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 AP000322.3-201ENST00000608665 388 ntBASIC13.26□□□□□ -0.29
SKP1P63208 AC074138.1-201ENST00000611182 1303 ntBASIC13.26□□□□□ -0.29
SKP1P63208 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.26□□□□□ -0.29
SKP1P63208 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SKP1P63208 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SKP1P63208 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.26□□□□□ -0.29
SKP1P63208 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SKP1P63208 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SKP1P63208 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SKP1P63208 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.26□□□□□ -0.29
SKP1P63208 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.25□□□□□ -0.29
SKP1P63208 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.25□□□□□ -0.29
SKP1P63208 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.25□□□□□ -0.29
SKP1P63208 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC13.25□□□□□ -0.29
SKP1P63208 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms