Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.79□□□□□ -0.52
COL8A2P25067 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC11.79□□□□□ -0.52
COL8A2P25067 TCAM1P-207ENST00000485295 1537 ntBASIC11.79□□□□□ -0.52
COL8A2P25067 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
COL8A2P25067 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
COL8A2P25067 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 AC090643.2-201ENST00000623442 2029 ntBASIC11.79□□□□□ -0.52
COL8A2P25067 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
COL8A2P25067 AC005252.3-201ENST00000623855 2258 ntBASIC11.79□□□□□ -0.52
COL8A2P25067 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
COL8A2P25067 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC11.79□□□□□ -0.52
COL8A2P25067 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.79□□□□□ -0.52
COL8A2P25067 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.79□□□□□ -0.52
COL8A2P25067 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.78□□□□□ -0.52
COL8A2P25067 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
COL8A2P25067 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
COL8A2P25067 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
COL8A2P25067 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.78□□□□□ -0.52
COL8A2P25067 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.78□□□□□ -0.52
COL8A2P25067 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
COL8A2P25067 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
COL8A2P25067 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 OR52M2P-201ENST00000414298 959 ntBASIC11.78□□□□□ -0.52
COL8A2P25067 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC11.78□□□□□ -0.52
COL8A2P25067 AC092573.1-201ENST00000433054 884 ntBASIC11.78□□□□□ -0.52
COL8A2P25067 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC11.78□□□□□ -0.52
COL8A2P25067 STK24P1-201ENST00000455035 1291 ntBASIC11.78□□□□□ -0.52
COL8A2P25067 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
COL8A2P25067 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC11.78□□□□□ -0.52
COL8A2P25067 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC11.78□□□□□ -0.52
COL8A2P25067 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC11.78□□□□□ -0.52
COL8A2P25067 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC11.78□□□□□ -0.52
COL8A2P25067 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC11.78□□□□□ -0.52
COL8A2P25067 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC11.78□□□□□ -0.52
COL8A2P25067 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC11.78□□□□□ -0.52
COL8A2P25067 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
COL8A2P25067 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC11.78□□□□□ -0.52
COL8A2P25067 AC009084.3-201ENST00000623356 437 ntBASIC11.78□□□□□ -0.52
COL8A2P25067 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.78□□□□□ -0.52
COL8A2P25067 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
COL8A2P25067 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
COL8A2P25067 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
COL8A2P25067 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
COL8A2P25067 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
COL8A2P25067 CYP51A1P3-201ENST00000400072 1428 ntBASIC11.77□□□□□ -0.52
COL8A2P25067 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
COL8A2P25067 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
COL8A2P25067 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.77□□□□□ -0.52
COL8A2P25067 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.52
COL8A2P25067 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.77□□□□□ -0.52
COL8A2P25067 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
COL8A2P25067 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
COL8A2P25067 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.77□□□□□ -0.52
COL8A2P25067 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.77□□□□□ -0.52
COL8A2P25067 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.52
COL8A2P25067 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
COL8A2P25067 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
COL8A2P25067 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
COL8A2P25067 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.77□□□□□ -0.52
COL8A2P25067 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
COL8A2P25067 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
COL8A2P25067 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
COL8A2P25067 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
COL8A2P25067 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
COL8A2P25067 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.77□□□□□ -0.53
COL8A2P25067 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms