Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14□□□□□ -0.17
SMAD6O43541 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14□□□□□ -0.17
SMAD6O43541 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
SMAD6O43541 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14□□□□□ -0.17
SMAD6O43541 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14□□□□□ -0.17
SMAD6O43541 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14□□□□□ -0.17
SMAD6O43541 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14□□□□□ -0.17
SMAD6O43541 AC084752.1-201ENST00000509766 622 ntBASIC14□□□□□ -0.17
SMAD6O43541 CTBP2P4-201ENST00000513884 920 ntBASIC14□□□□□ -0.17
SMAD6O43541 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14□□□□□ -0.17
SMAD6O43541 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14□□□□□ -0.17
SMAD6O43541 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14□□□□□ -0.17
SMAD6O43541 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14□□□□□ -0.17
SMAD6O43541 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
SMAD6O43541 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 MARK2P9-201ENST00000430958 1727 ntBASIC14□□□□□ -0.17
SMAD6O43541 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14□□□□□ -0.17
SMAD6O43541 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SMAD6O43541 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SMAD6O43541 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SMAD6O43541 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SMAD6O43541 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SMAD6O43541 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SMAD6O43541 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SMAD6O43541 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.99□□□□□ -0.17
SMAD6O43541 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.99□□□□□ -0.17
SMAD6O43541 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 BAK1P1-201ENST00000317045 636 ntBASIC13.99□□□□□ -0.17
SMAD6O43541 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.99□□□□□ -0.17
SMAD6O43541 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.99□□□□□ -0.17
SMAD6O43541 GNG10P1-201ENST00000452289 199 ntBASIC13.99□□□□□ -0.17
SMAD6O43541 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.99□□□□□ -0.17
SMAD6O43541 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.99□□□□□ -0.17
SMAD6O43541 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.99□□□□□ -0.17
SMAD6O43541 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC13.99□□□□□ -0.17
SMAD6O43541 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.99□□□□□ -0.17
SMAD6O43541 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.99□□□□□ -0.17
SMAD6O43541 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.99□□□□□ -0.17
SMAD6O43541 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.99□□□□□ -0.17
SMAD6O43541 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
SMAD6O43541 AC010327.5-201ENST00000586923 3061 ntBASIC13.99□□□□□ -0.17
SMAD6O43541 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SMAD6O43541 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.99□□□□□ -0.17
SMAD6O43541 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
SMAD6O43541 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SMAD6O43541 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMAD6O43541 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SMAD6O43541 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
SMAD6O43541 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 NCLP1-201ENST00000445357 1963 ntBASIC13.98□□□□□ -0.17
SMAD6O43541 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
SMAD6O43541 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SMAD6O43541 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SMAD6O43541 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SMAD6O43541 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms