Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 AL139158.3-201ENST00000641212 1562 ntBASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
POLR1DQ9Y2S0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 RCC2P1-201ENST00000452257 1476 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 AC107918.4-201ENST00000641966 3141 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 AC078875.1-201ENST00000431907 724 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 VDAC1P1-201ENST00000439229 848 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 MIR4259-201ENST00000584466 101 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 AC005324.6-201ENST00000587972 613 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 BNIP3P13-201ENST00000599968 566 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 AC090164.2-201ENST00000611487 516 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 AC005695.3-201ENST00000614522 232 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 CR392039.2-201ENST00000623182 509 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 AC004923.1-202ENST00000642106 209 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 NCLP1-201ENST00000445357 1963 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 FAM90A7P-201ENST00000382628 1395 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 FAM90A23P-201ENST00000400136 1395 ntBASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
POLR1DQ9Y2S0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
POLR1DQ9Y2S0 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms