Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13□□□□□ -0.33
HPS1Q92902 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 AC012441.1-201ENST00000446669 685 ntBASIC13□□□□□ -0.33
HPS1Q92902 BNIP3P42-201ENST00000454982 569 ntBASIC13□□□□□ -0.33
HPS1Q92902 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 GAPDHP40-201ENST00000505218 1006 ntBASIC13□□□□□ -0.33
HPS1Q92902 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13□□□□□ -0.33
HPS1Q92902 MFF-223ENST00000524634 647 ntTSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13□□□□□ -0.33
HPS1Q92902 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13□□□□□ -0.33
HPS1Q92902 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13□□□□□ -0.33
HPS1Q92902 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13□□□□□ -0.33
HPS1Q92902 SAMD11P1-201ENST00000571429 661 ntBASIC13□□□□□ -0.33
HPS1Q92902 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13□□□□□ -0.33
HPS1Q92902 BNIP3P29-201ENST00000598302 571 ntBASIC13□□□□□ -0.33
HPS1Q92902 AC011447.5-201ENST00000616168 564 ntBASIC13□□□□□ -0.33
HPS1Q92902 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13□□□□□ -0.33
HPS1Q92902 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13□□□□□ -0.33
HPS1Q92902 C2-209ENST00000452323 1999 ntTSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
HPS1Q92902 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.99□□□□□ -0.33
HPS1Q92902 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HPS1Q92902 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.99□□□□□ -0.33
HPS1Q92902 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.99□□□□□ -0.33
HPS1Q92902 AL583810.2-201ENST00000556430 3254 ntBASIC12.99□□□□□ -0.33
HPS1Q92902 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
HPS1Q92902 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 AC134312.5-201ENST00000568031 1313 ntBASIC12.99□□□□□ -0.33
HPS1Q92902 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HPS1Q92902 AC092933.1-201ENST00000393644 945 ntBASIC12.99□□□□□ -0.33
HPS1Q92902 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.99□□□□□ -0.33
HPS1Q92902 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 MTND2P15-201ENST00000418575 892 ntBASIC12.99□□□□□ -0.33
HPS1Q92902 AC136604.1-202ENST00000425471 771 ntBASIC12.99□□□□□ -0.33
HPS1Q92902 AC016694.1-201ENST00000434179 700 ntBASIC12.99□□□□□ -0.33
HPS1Q92902 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC12.99□□□□□ -0.33
HPS1Q92902 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 AC007551.1-201ENST00000457394 519 ntBASIC12.99□□□□□ -0.33
HPS1Q92902 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.99□□□□□ -0.33
HPS1Q92902 KRT18P25-201ENST00000508931 1278 ntBASIC12.99□□□□□ -0.33
HPS1Q92902 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.99□□□□□ -0.33
HPS1Q92902 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC12.99□□□□□ -0.33
HPS1Q92902 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.99□□□□□ -0.33
HPS1Q92902 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.99□□□□□ -0.33
HPS1Q92902 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.99□□□□□ -0.33
HPS1Q92902 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.99□□□□□ -0.33
HPS1Q92902 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 AL357140.3-201ENST00000639753 1983 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms