Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 TUBB2BP1-201ENST00000404155 871 ntBASIC13.19□□□□□ -0.3
RAE1P78406 EEF1DP2-201ENST00000433698 843 ntBASIC13.19□□□□□ -0.3
RAE1P78406 AC098934.1-203ENST00000442868 1262 ntBASIC13.19□□□□□ -0.3
RAE1P78406 RN7SL788P-201ENST00000460504 316 ntBASIC13.19□□□□□ -0.3
RAE1P78406 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.19□□□□□ -0.3
RAE1P78406 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.19□□□□□ -0.3
RAE1P78406 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.19□□□□□ -0.3
RAE1P78406 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.19□□□□□ -0.3
RAE1P78406 AC026803.1-201ENST00000569130 274 ntBASIC13.19□□□□□ -0.3
RAE1P78406 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.19□□□□□ -0.3
RAE1P78406 AC132825.4-202ENST00000578792 434 ntBASIC13.19□□□□□ -0.3
RAE1P78406 MIR4326-201ENST00000582203 59 ntBASIC13.19□□□□□ -0.3
RAE1P78406 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
RAE1P78406 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.19□□□□□ -0.3
RAE1P78406 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
RAE1P78406 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.19□□□□□ -0.3
RAE1P78406 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 EGLN3-205ENST00000547327 2849 ntBASIC13.19□□□□□ -0.3
RAE1P78406 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.19□□□□□ -0.3
RAE1P78406 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.19□□□□□ -0.3
RAE1P78406 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.19□□□□□ -0.3
RAE1P78406 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RAE1P78406 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RAE1P78406 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 AC007336.3-201ENST00000623886 2160 ntBASIC13.18□□□□□ -0.3
RAE1P78406 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RAE1P78406 KRT18P9-201ENST00000604826 1300 ntBASIC13.18□□□□□ -0.3
RAE1P78406 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC13.18□□□□□ -0.3
RAE1P78406 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC13.18□□□□□ -0.3
RAE1P78406 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 LINC00567-201ENST00000569854 3409 ntBASIC13.18□□□□□ -0.3
RAE1P78406 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.18□□□□□ -0.3
RAE1P78406 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.18□□□□□ -0.3
RAE1P78406 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.18□□□□□ -0.3
RAE1P78406 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.18□□□□□ -0.3
RAE1P78406 AC026320.2-201ENST00000434379 478 ntBASIC13.18□□□□□ -0.3
RAE1P78406 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.18□□□□□ -0.3
RAE1P78406 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.18□□□□□ -0.3
RAE1P78406 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.18□□□□□ -0.3
RAE1P78406 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.18□□□□□ -0.3
RAE1P78406 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.18□□□□□ -0.3
RAE1P78406 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.18□□□□□ -0.3
RAE1P78406 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RAE1P78406 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 DLX4-206ENST00000611342 1662 ntBASIC13.18□□□□□ -0.3
RAE1P78406 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RAE1P78406 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RAE1P78406 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAE1P78406 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAE1P78406 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.17□□□□□ -0.3
RAE1P78406 GHET1-201ENST00000627071 1906 ntBASIC13.17□□□□□ -0.3
RAE1P78406 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAE1P78406 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms