Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
COPB2P35606 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.88■□□□□ 0.13
COPB2P35606 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.88■□□□□ 0.13
COPB2P35606 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 MIR566-201ENST00000385187 94 ntBASIC15.88■□□□□ 0.13
COPB2P35606 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.88■□□□□ 0.13
COPB2P35606 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.88■□□□□ 0.13
COPB2P35606 HLA-DPA2-205ENST00000433582 733 ntBASIC15.88■□□□□ 0.13
COPB2P35606 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 GULOP-201ENST00000454030 748 ntBASIC15.88■□□□□ 0.13
COPB2P35606 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 RN7SL351P-201ENST00000469306 248 ntBASIC15.88■□□□□ 0.13
COPB2P35606 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC15.88■□□□□ 0.13
COPB2P35606 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC15.88■□□□□ 0.13
COPB2P35606 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC15.88■□□□□ 0.13
COPB2P35606 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC15.88■□□□□ 0.13
COPB2P35606 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.88■□□□□ 0.13
COPB2P35606 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC15.88■□□□□ 0.13
COPB2P35606 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.88■□□□□ 0.13
COPB2P35606 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.88■□□□□ 0.13
COPB2P35606 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.88■□□□□ 0.13
COPB2P35606 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.88■□□□□ 0.13
COPB2P35606 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
COPB2P35606 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
COPB2P35606 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.87■□□□□ 0.13
COPB2P35606 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COPB2P35606 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
COPB2P35606 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
COPB2P35606 AC061965.1-201ENST00000560524 1465 ntBASIC15.87■□□□□ 0.13
COPB2P35606 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 AC022080.1-201ENST00000366255 781 ntBASIC15.87■□□□□ 0.13
COPB2P35606 PIFO-201ENST00000369737 746 ntTSL 2 BASIC15.87■□□□□ 0.13
COPB2P35606 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.87■□□□□ 0.13
COPB2P35606 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.87■□□□□ 0.13
COPB2P35606 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC15.87■□□□□ 0.13
COPB2P35606 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.87■□□□□ 0.13
COPB2P35606 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC15.87■□□□□ 0.13
COPB2P35606 AC079250.1-201ENST00000456046 531 ntBASIC15.87■□□□□ 0.13
COPB2P35606 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC15.87■□□□□ 0.13
COPB2P35606 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.87■□□□□ 0.13
COPB2P35606 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC15.87■□□□□ 0.13
COPB2P35606 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC15.87■□□□□ 0.13
COPB2P35606 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.87■□□□□ 0.13
COPB2P35606 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
COPB2P35606 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.87■□□□□ 0.13
COPB2P35606 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.87■□□□□ 0.13
COPB2P35606 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
COPB2P35606 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.87■□□□□ 0.13
COPB2P35606 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC15.87■□□□□ 0.13
COPB2P35606 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC15.87■□□□□ 0.13
COPB2P35606 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COPB2P35606 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COPB2P35606 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COPB2P35606 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.86■□□□□ 0.13
COPB2P35606 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.86■□□□□ 0.13
COPB2P35606 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.86■□□□□ 0.13
COPB2P35606 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COPB2P35606 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms