Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 CD99P1-205ENST00000527459 561 ntBASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.63■■□□□ 1.69
PTCH2Q9Y6C5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.62■■□□□ 1.69
PTCH2Q9Y6C5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PTCH2Q9Y6C5 NCF1B-203ENST00000435988 1254 ntBASIC25.62■■□□□ 1.69
PTCH2Q9Y6C5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.62■■□□□ 1.69
PTCH2Q9Y6C5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
PTCH2Q9Y6C5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PTCH2Q9Y6C5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCH2Q9Y6C5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PTCH2Q9Y6C5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCH2Q9Y6C5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PTCH2Q9Y6C5 TSPY20P-201ENST00000450910 630 ntBASIC25.61■■□□□ 1.69
PTCH2Q9Y6C5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.61■■□□□ 1.69
PTCH2Q9Y6C5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PTCH2Q9Y6C5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.61■■□□□ 1.69
PTCH2Q9Y6C5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PTCH2Q9Y6C5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.6■■□□□ 1.69
PTCH2Q9Y6C5 AC105233.4-201ENST00000642045 216 ntBASIC25.6■■□□□ 1.69
PTCH2Q9Y6C5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
PTCH2Q9Y6C5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.6■■□□□ 1.69
PTCH2Q9Y6C5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
PTCH2Q9Y6C5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PTCH2Q9Y6C5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PTCH2Q9Y6C5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.59■■□□□ 1.69
PTCH2Q9Y6C5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCH2Q9Y6C5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.59■■□□□ 1.69
PTCH2Q9Y6C5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.59■■□□□ 1.69
PTCH2Q9Y6C5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.59■■□□□ 1.69
PTCH2Q9Y6C5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PTCH2Q9Y6C5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCH2Q9Y6C5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCH2Q9Y6C5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCH2Q9Y6C5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.59■■□□□ 1.69
PTCH2Q9Y6C5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PTCH2Q9Y6C5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PTCH2Q9Y6C5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PTCH2Q9Y6C5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.58■■□□□ 1.69
PTCH2Q9Y6C5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PTCH2Q9Y6C5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PTCH2Q9Y6C5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.58■■□□□ 1.69
PTCH2Q9Y6C5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.58■■□□□ 1.69
PTCH2Q9Y6C5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC25.58■■□□□ 1.69
PTCH2Q9Y6C5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.58■■□□□ 1.69
PTCH2Q9Y6C5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PTCH2Q9Y6C5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
PTCH2Q9Y6C5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.58■■□□□ 1.68
PTCH2Q9Y6C5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
PTCH2Q9Y6C5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.57■■□□□ 1.68
PTCH2Q9Y6C5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PTCH2Q9Y6C5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.56■■□□□ 1.68
PTCH2Q9Y6C5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCH2Q9Y6C5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.56■■□□□ 1.68
PTCH2Q9Y6C5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCH2Q9Y6C5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PTCH2Q9Y6C5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PTCH2Q9Y6C5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCH2Q9Y6C5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCH2Q9Y6C5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCH2Q9Y6C5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 OR2I1P-207ENST00000453522 948 ntBASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 AL499627.2-201ENST00000606283 725 ntBASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.55■■□□□ 1.68
PTCH2Q9Y6C5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.54■■□□□ 1.68
PTCH2Q9Y6C5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PTCH2Q9Y6C5 AP004607.4-201ENST00000530158 1459 ntBASIC25.54■■□□□ 1.68
PTCH2Q9Y6C5 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.54■■□□□ 1.68
PTCH2Q9Y6C5 MIR663A-201ENST00000385250 93 ntBASIC25.54■■□□□ 1.68
PTCH2Q9Y6C5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.54■■□□□ 1.68
PTCH2Q9Y6C5 APTR-205ENST00000447009 902 ntTSL 2 BASIC25.54■■□□□ 1.68
PTCH2Q9Y6C5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PTCH2Q9Y6C5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.54■■□□□ 1.68
PTCH2Q9Y6C5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PTCH2Q9Y6C5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.53■■□□□ 1.68
PTCH2Q9Y6C5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms